Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P3C28_RS07655 Genome accession   NZ_OU532558
Coordinates   1447591..1448559 (+) Length   322 a.a.
NCBI ID   WP_050457999.1    Uniprot ID   -
Organism   Campylobacter jejuni isolate     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1442591..1453559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3C28_RS07630 (CJ121364_001494) cdsA 1443501..1444226 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  P3C28_RS07635 (CJ121364_001495) - 1444235..1444573 (-) 339 WP_002934880.1 hypothetical protein -
  P3C28_RS07640 (CJ121364_001496) - 1444575..1445882 (-) 1308 WP_002860790.1 NFACT family protein -
  P3C28_RS07645 (CJ121364_001497) mobA 1445944..1446519 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  P3C28_RS07650 (CJ121364_001498) pldA 1446516..1447505 (+) 990 WP_002864239.1 phospholipase A -
  P3C28_RS07655 (CJ121364_001499) ceuB 1447591..1448559 (+) 969 WP_050457999.1 ABC transporter permease Machinery gene
  P3C28_RS07660 (CJ121364_001500) ceuC 1448552..1449490 (+) 939 WP_002884174.1 iron chelate uptake ABC transporter family permease subunit -
  P3C28_RS07665 (CJ121364_001501) ceuD 1449487..1450242 (+) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  P3C28_RS07670 (CJ121364_001502) ceuB 1450255..1451247 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  P3C28_RS07680 (CJ121364_001504) - 1451473..1452027 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35413.29 Da        Isoelectric Point: 9.6678

>NTDB_id=1035440 P3C28_RS07655 WP_050457999.1 1447591..1448559(+) (ceuB) [Campylobacter jejuni isolate]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLAALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1035440 P3C28_RS07655 WP_050457999.1 1447591..1448559(+) (ceuB) [Campylobacter jejuni isolate]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGCAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991