Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACA343_RS26045 | Genome accession | NZ_CP166821 |
| Coordinates | 5553178..5553735 (+) | Length | 185 a.a. |
| NCBI ID | WP_019486632.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain J5083553 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5548178..5558735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACA343_RS26025 (ACA343_26025) | pilR | 5549454..5550791 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| ACA343_RS26030 (ACA343_26030) | thiO | 5550837..5551931 (-) | 1095 | WP_023094393.1 | glycine oxidase ThiO | - |
| ACA343_RS26035 (ACA343_26035) | - | 5552066..5552575 (+) | 510 | WP_019486634.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACA343_RS26040 (ACA343_26040) | - | 5552681..5553187 (+) | 507 | WP_019486633.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACA343_RS26045 (ACA343_26045) | pilV | 5553178..5553735 (+) | 558 | WP_019486632.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACA343_RS26050 (ACA343_26050) | pilW | 5553732..5554556 (+) | 825 | WP_023094394.1 | type 4a pilus minor pilin PilW | - |
| ACA343_RS26055 (ACA343_26055) | pilX | 5554553..5555140 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ACA343_RS26060 (ACA343_26060) | pilY1 | 5555152..5558637 (+) | 3486 | WP_019486630.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20086.26 Da Isoelectric Point: 7.9204
>NTDB_id=1035382 ACA343_RS26045 WP_019486632.1 5553178..5553735(+) (pilV) [Pseudomonas aeruginosa strain J5083553]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1035382 ACA343_RS26045 WP_019486632.1 5553178..5553735(+) (pilV) [Pseudomonas aeruginosa strain J5083553]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |