Detailed information NTG1035303

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LIX80_RS06920
• Genome accession: NZ_OU342919
• Coordinates: 1447915..1448940 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate UR21/11-869
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1442915..1453940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIX80_RS06910 (AMUR21_01353)	rpmE	1445146..1445358 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LIX80_RS06915 (AMUR21_01354)	priA	1445561..1447759 (+)	2199	WP_001325632.1	primosomal protein N'	Machinery gene
LIX80_RS06920 (AMUR21_01355)	cytR	1447915..1448940 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LIX80_RS06925 (AMUR21_01356)	ftsN	1449032..1449991 (+)	960	WP_000068834.1	cell division protein FtsN	-
LIX80_RS06930 (AMUR21_01357)	hslV	1450084..1450614 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LIX80_RS06935 (AMUR21_01358)	hslU	1450624..1451955 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
LIX80_RS06940 (AMUR21_01359)	menA	1452022..1452948 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LIX80_RS06945 (AMUR21_01360)	rraA	1453041..1453526 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LIX80_RS06950 (AMUR21_01361)	zapB	1453611..1453856 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1035303 LIX80_RS06920 WP_000644904.1 1447915..1448940(+) (cytR) [Escherichia coli isolate UR21/11-869]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1035303 LIX80_RS06920 WP_000644904.1 1447915..1448940(+) (cytR) [Escherichia coli isolate UR21/11-869]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628