Detailed information NTG0103519

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: QUF19_RS14030
• Genome accession: NZ_AP028067
• Coordinates: 3164046..3167435 (+)
• Length: 1129 a.a.
• NCBI ID: WP_286294705.1
• Uniprot ID: -
• Organism: Vibrio sp. FE10
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3159046..3172435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUF19_RS14010	erpA	3159345..3159686 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
QUF19_RS14015	hemL	3159983..3161290 (+)	1308	WP_286294704.1	glutamate-1-semialdehyde 2,1-aminomutase	-
QUF19_RS14020	-	3161611..3162696 (+)	1086	WP_017108746.1	AI-2E family transporter	-
QUF19_RS14025	rsmC	3162807..3163829 (+)	1023	WP_102437740.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
QUF19_RS14030	chiS	3164046..3167435 (+)	3390	WP_286294705.1	response regulator	Regulator
QUF19_RS14035	-	3168144..3169826 (+)	1683	WP_102437736.1	ABC transporter substrate-binding protein	-
QUF19_RS14040	-	3169996..3170982 (+)	987	WP_102437734.1	ABC transporter permease	-
QUF19_RS14045	-	3170985..3172010 (+)	1026	WP_192889341.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127303.97 Da
• Isoelectric Point: 5.3698

>NTDB_id=103519 QUF19_RS14030 WP_286294705.1 3164046..3167435(+) (chiS) [Vibrio sp. FE10]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSVFKRDNYGTNLLTGKYKDSNLGVTFQRLTKDVTDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTLDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYNESGSYSHFQAPDLFDNAQQENSVISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIREDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVEAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRFETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=103519 QUF19_RS14030 WP_286294705.1 3164046..3167435(+) (chiS) [Vibrio sp. FE10]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCGTTTCTCGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATCTTTTTCCTTCAATCGCACAGTCAGGATCTTCAAGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAGCAGCAAATCGTCGATTACCTACAGGCACAAGAGTCGCAAGTCATGGGCTTTGTTCGCTCA
GAGCTAGCCAATGCCAGTGGTGGACGTTTCTACGGTTTAATCAATGCCTTTCAACGACTCGGCTTAGATATTGATGAAGC
GCGCAGCAATGCTCAACAGCGCTACATTCAAGGTTCAGGCGATCAAATCAAAACATCTATACTTCCTGAGTCGAGCAGTT
TCATCGGAAGCGAACGCTATCGCTTGCTGCATAAGCGCTACCATAACTCATATCAAGAACTGCTTAAGCGTTCAGACTTT
GATGACATTCTATTAGTCGACATTAACGGCAACGTCGCTTATTCCGTATTTAAGCGTGATAACTACGGGACCAACTTACT
GACCGGCAAATACAAAGATTCAAACCTTGGGGTCACCTTTCAAAGGCTGACTAAGGACGTAACAGACAAGCGTAAATCCA
ACGAAGATTACACCCCTGTTATCGTGTCTGACTTTAAAGACGAAAACGGCAAGCAAACCGCATGGCTCGGTGCGCCTATT
GTTCAACAAGGGTATTTGCACAGCTATGCGATGTTCAGACTGCCAATTAACGGTATTACCAAGTTGATTGCTGATCTAAA
CAAAAGCTCAAATATTCAAACACTTCTTGTTGGTAGTGACCACTTACCTCGTAGCCTTGCTCACTCTCAAGAATCGATTA
ACCTGAGCTTAGATGTTGTCGACAAAGCTCTGGCAGGTGAAACCGCAGTAGGCACGTTTGACAACACTCTCGATCAAGCG
ATCATCGCTGCTTACACCCCGATTGAGCTTAAGTACGCTACTTGGGCATTGGTTGTCGAGCTGCCAGAAAAAGAGGCGTT
TGCTCGCATCCATCAATTAGAAAAGATCTTCGTGATTGTGATGCTAACAGCGATCATTCTCGTGTTTGTTGCATCGCACT
ACTTATCGAACTTCATCACCTCGCCATTGTTAAAGCTCACTTGGGCGGCCGAGAAGGTCTCCGCTGGCGATCTTGATGAA
ACGATGATCAATACCGAGCGTAAAGACGAAATAGGTCGCCTAGCTGTCAGCTTTGAAAGGATGCAGCGTTCTATTCGTGA
AAAAATGCTGCTGATTAAAAGTCAAAATGATGAGTTAGAGGACAATCTCAAAACGATTCAAAAACAAAACGAAGAATTGC
AGCTTGCCAATAAACTGAAAGATGAATTCTTGGCAACGACTTCGCATGAACTCAGAACACCACTGCATGGCATGGTTGGT
ATCGCAGAGGCACTAATATCTGGTGCCAACGGCCCTATTCCTGCCAACCAGAAGTACCAGTTGGATATCATCATCAATAG
CGGTCAGAGATTGGCGACCTTGGTCGATGACCTGCTCGATTACCACAAGATGCGCTATGGCAGCTTAGATATTAAGAAAT
CAGCCGTAGATTTGTCTGCTGCCACCAGCTTAGTGCTTGAGTTATCTCATCATCTGTTAGGCAACAAACCAATCCGTATT
ATCAACCAAGTGCCAAGTGATTTAGGGTTAGTCTCATCTGATCCTCAACGACTGGAACAGGTGATGTATAACTTGGTCGG
CAATGCAATCAAGTACACATCCGAGGGTAAGATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACCGGCCAAGGTATCCCAGCAGAGTACCTAGAACACATCTTTGAACCACTCATTCAAGCAGGCCAAGACTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTGTCCATTAGTCGTCAGCTGATCGAGCTAATGGGTGGCTCATTGTATGTAAG
TAGCCAGCCTATGCTTGGGACGACCTTCAGCTTCACATTACCTTTAGCTACCCAAGAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCTCACTTCCAAGCACCTGATTTGTTTGATAACGCACAACAAGAAAACAGCGTTATCAGTGAAGACCCG
AATGGCCCGTTGTTAGTGATTGCTGACGATGAGCCGGTCAACTTACGCGTGTTAGACAGCTTCTTAAAATTGGAAGGCTA
TCGAGTTCGCACCGCATGTGACGGTCCGGAAACGATTGAACTGATTGAGAAAGAAAAGCCTGAACTGCTTCTACTCGACA
TCATGATGCCGGGCATGAGTGGCTATCAGGTGTGTGAAGCGCTGCGTAAGCAATATGACCACGCACAACTGCCAATCATC
ATGCTCACTGCACTCAATCAAGCAGAAGACCGTGTTCGTGGCTTTGAAGCGGGTGCCAACGATTACTTATCCAAGCCGTT
TAACAAACAGGAACTGGCAGCTCGAATCACAGCGCACTTATCGGCAAGTAAGGCGGAACAGAGACGCCTTGAGAATGATC
AGCTGCAACTGGAACTCAAACACCGTGCCATGGTTGAAGCTAACCTGCTCGAAACTCAAGGACGCTTGCTAGAACAGTTA
GAATCAGCTCCAGAAGCCATTATCTGTATTCGAGAAGACCAACGCATTCGCTTTGCCAACGAAGCGGCAGCGAAACTGTT
TAGACGCGGACAAGAACAACTGAAGCGCTCAATGGCCGACGAAATCATTGCCCCTAAATACCTCAAGGTGGAACAAGCTC
ACTACTGTGGTGACATCGATATCTATATTGATGACACGCGTCAGCGCATACCAAGTGACATTCTCAAACTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTCAATGTCGGTGGTGGTGTTAACTCGAACCGTATCAATAACCTTGAAACGGCGGT
TGAGGCGCTTTCAAGCTACGCCTTTGAAGGCGACAAAGACAAACTGCAGCAACTGAAAGAGCTCGGTGGTGAGTTCACTC
GCCTTGCTGATAAGGCAACCGGTGAAGGTAAAAACAAACAAGAGCTAATGCGCGAAGTGTTAGTGGAGGCGATGACCAAT
GCGATCATTTATTGGGAGTCAGTCACAGGTGAAACCAAGTTTGCTTTCGCAGAGAAGAGTGGCTTGTGGCGTGTTTATTT
AGACCGAAGCACGCTTCAAACTCGCACCTTAGATAAATATCTACGCTTTGAAACCTTACCGAAAACGCCTCGCTGGCGAA
CGGTATTGAGCTCTATCGAGTTTATTTTAGAGCACTGTAAAGAACAGACACCTGAAAGAACTCACATCGAGATGCTCAGA
GACAAGCTACAGAAATTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-922)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.765