Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DYY94_RS03730 Genome accession   NZ_LT996890
Coordinates   740074..740748 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus isolate 24117-SCV     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 735074..745748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYY94_RS03715 vraG 736257..738146 (-) 1890 WP_000143623.1 ABC transporter permease VraG -
  DYY94_RS03720 vraF 738136..738897 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  DYY94_RS03725 graS 739041..740081 (-) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  DYY94_RS03730 braR 740074..740748 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  DYY94_RS03735 graX 740764..741687 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  DYY94_RS03740 - 741800..742306 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  DYY94_RS03745 - 742515..742943 (-) 429 WP_000198504.1 hypothetical protein -
  DYY94_RS03755 - 743272..744315 (-) 1044 WP_001030770.1 alpha/beta hydrolase -
  DYY94_RS03760 - 744466..745533 (-) 1068 WP_000980137.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=1035141 DYY94_RS03730 WP_001166500.1 740074..740748(-) (braR) [Staphylococcus aureus isolate 24117-SCV]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1035141 DYY94_RS03730 WP_001166500.1 740074..740748(-) (braR) [Staphylococcus aureus isolate 24117-SCV]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397