Detailed information NTG0103512

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: STAB904_RS04915
• Genome accession: NZ_CP007241
• Coordinates: 968945..970015 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain 1E1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 963945..975015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STAB904_RS04895 (STAB904_05510)	citX	964526..965104 (+)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-
STAB904_RS04900 (STAB904_05515)	-	965119..966513 (+)	1395	WP_038434102.1	oxaloacetate decarboxylase subunit alpha	-
STAB904_RS04905 (STAB904_05520)	citC	966623..967675 (-)	1053	WP_038434103.1	[citrate (pro-3S)-lyase] ligase	-
STAB904_RS04910 (STAB904_05525)	-	967764..968246 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
STAB904_RS04915 (STAB904_05535)	xerS	968945..970015 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
STAB904_RS04920 (STAB904_05540)	-	970460..971158 (+)	699	WP_038434104.1	XRE family transcriptional regulator	-
STAB904_RS04925 (STAB904_05545)	ffh	971275..972837 (-)	1563	WP_038434105.1	signal recognition particle protein	-
STAB904_RS04930 (STAB904_05550)	-	972852..973184 (-)	333	WP_002989745.1	putative DNA-binding protein	-
STAB904_RS04935 (STAB904_05555)	-	973282..973980 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=103512 STAB904_RS04915 WP_002984598.1 968945..970015(-) (xerS) [Streptococcus pyogenes strain 1E1]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=103512 STAB904_RS04915 WP_002984598.1 968945..970015(-) (xerS) [Streptococcus pyogenes strain 1E1]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGTCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATCTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806