Detailed information NTG1035053

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACA027_RS05655
• Genome accession: NZ_CP166730
• Coordinates: 1271802..1272989 (-)
• Length: 395 a.a.
• NCBI ID: WP_370681430.1
• Uniprot ID: -
• Organism: Comamonas sp. GB3 AK4-5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1266802..1277989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA027_RS05640 (ACA027_05640)	fdnG	1267031..1270147 (-)	3117	WP_370681427.1	formate dehydrogenase-N subunit alpha	-
ACA027_RS05645 (ACA027_05645)	-	1270591..1270938 (-)	348	WP_370681428.1	winged helix-turn-helix domain-containing protein	-
ACA027_RS05650 (ACA027_05650)	cutA	1271221..1271610 (+)	390	WP_370681429.1	divalent-cation tolerance protein CutA	-
ACA027_RS05655 (ACA027_05655)	pilA	1271802..1272989 (-)	1188	WP_370681430.1	signal recognition particle-docking protein FtsY	Machinery gene
ACA027_RS05660 (ACA027_05660)	-	1273018..1274493 (+)	1476	WP_370681431.1	M16 family metallopeptidase	-
ACA027_RS05665 (ACA027_05665)	-	1274513..1275868 (+)	1356	WP_370681432.1	M16 family metallopeptidase	-
ACA027_RS05670 (ACA027_05670)	rsmD	1275901..1276626 (+)	726	WP_370682518.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACA027_RS05675 (ACA027_05675)	coaD	1276838..1277332 (+)	495	WP_370681433.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 41566.52 Da
• Isoelectric Point: 5.9494

>NTDB_id=1035053 ACA027_RS05655 WP_370681430.1 1271802..1272989(-) (pilA) [Comamonas sp. GB3 AK4-5]
MFSFFKKKPPHTEPVAPETEGLRSDAQAPVSHAPAPVVPQPAPEEPAKSGAMGWLRTTFGGTKGDATPAQPAGDAPPPDF
AMPTVAEPQAKPEAADARQGWMDRLKAGLRKTGSSITTVFTGTRIDDALYEELEDALLMADTGVKATQHLLEDLKRRVKD
TKTTEPAAVKGLLAQALTDLLAPLQKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTKHLADNGQTVLLAAADTFRAAARE
QLGVWATRNTVEIVSQEGGDPAAVSFDAVSAGKARKKDVVLVDTAGRLPTQLHLMEELKKIKRVVSKADGTAPHEVLLVI
DGNTGQNALNQVKAFDEALGLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAAEFAQALLA

Nucleotide

• Length: 1188 bp

>NTDB_id=1035053 ACA027_RS05655 WP_370681430.1 1271802..1272989(-) (pilA) [Comamonas sp. GB3 AK4-5]
ATGTTCAGTTTTTTCAAGAAAAAGCCCCCACACACCGAGCCCGTCGCCCCCGAAACGGAAGGCCTTCGGTCCGATGCACA
GGCGCCCGTGTCCCATGCGCCCGCCCCTGTCGTGCCCCAGCCAGCTCCCGAGGAACCCGCCAAAAGCGGGGCCATGGGCT
GGCTGCGCACCACCTTTGGCGGCACCAAGGGTGATGCTACTCCGGCCCAGCCCGCTGGCGACGCGCCGCCCCCAGATTTC
GCCATGCCCACCGTGGCCGAGCCCCAGGCCAAGCCCGAAGCGGCCGACGCCCGCCAGGGCTGGATGGACCGGCTCAAGGC
CGGTCTGCGCAAAACCGGCAGCAGCATCACCACCGTCTTCACCGGCACACGCATTGACGATGCGCTGTATGAAGAGCTGG
AAGACGCGCTGTTGATGGCCGACACCGGCGTCAAGGCCACCCAGCATCTGCTGGAAGACCTCAAGCGCCGCGTCAAGGAC
ACCAAGACCACCGAACCCGCCGCCGTCAAAGGCCTGCTGGCCCAGGCCCTGACCGATTTGCTGGCGCCCCTGCAAAAGCC
GCTGGTGATTGGCGAGCACCAGCCCACCGTCATCATGGTGGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATTGGCA
AGCTGACCAAGCACCTGGCTGACAACGGCCAGACCGTGCTGCTGGCGGCGGCCGACACCTTCCGCGCCGCCGCGCGCGAG
CAGTTGGGTGTCTGGGCCACGCGCAACACCGTGGAAATCGTCAGCCAGGAAGGGGGCGACCCCGCCGCCGTCAGCTTTGA
CGCAGTGTCTGCCGGCAAGGCACGCAAGAAGGACGTGGTGCTGGTCGACACGGCCGGACGCCTGCCCACCCAGCTGCACC
TGATGGAAGAGCTGAAGAAGATCAAGCGCGTGGTGAGCAAGGCCGATGGCACGGCCCCGCACGAGGTACTGCTGGTGATT
GATGGCAACACCGGCCAGAACGCCCTCAACCAGGTCAAGGCCTTTGACGAGGCCCTGGGCCTGACCGGGCTGATCGTCAC
CAAGCTGGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATCGCCCAGGAAAGGCCGATTCCGGTCTACTTCATCGGCG
TGGGCGAAAAGGTGGAAGATCTGGAAACCTTTAACGCCGCCGAGTTTGCCCAGGCCTTGCTGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (113-177)

• SRP54-type protein, GTPase domain (SRP54) (195-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.565	100	0.514