Detailed information NTG1034743

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AB6K15_RS10315
• Genome accession: NZ_CP166492
• Coordinates: 2152185..2153297 (-)
• Length: 370 a.a.
• NCBI ID: WP_007409910.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BC248L1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2147185..2158297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6K15_RS10300 (AB6K15_10305)	gyrA	2147274..2149733 (-)	2460	WP_407968025.1	DNA gyrase subunit A	-
AB6K15_RS10305 (AB6K15_10310)	gyrB	2149949..2151865 (-)	1917	WP_014720600.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AB6K15_RS10310 (AB6K15_10315)	remB	2151922..2152167 (-)	246	WP_004392908.1	extracellular matrix regulator RemB	-
AB6K15_RS10315 (AB6K15_10320)	recF	2152185..2153297 (-)	1113	WP_007409910.1	DNA replication/repair protein RecF	Machinery gene
AB6K15_RS10320 (AB6K15_10325)	rlbA	2153313..2153528 (-)	216	WP_004392910.1	ribosome maturation protein RlbA	-
AB6K15_RS10325 (AB6K15_10330)	dnaN	2153663..2154799 (-)	1137	WP_069006958.1	DNA polymerase III subunit beta	-
AB6K15_RS10330 (AB6K15_10335)	dnaA	2154984..2156324 (-)	1341	WP_007409908.1	chromosomal replication initiator protein DnaA	-
AB6K15_RS10335 (AB6K15_10340)	rpmH	2156945..2157079 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AB6K15_RS10340 (AB6K15_10345)	rnpA	2157233..2157583 (+)	351	WP_004392944.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42430.36 Da
• Isoelectric Point: 7.0882

>NTDB_id=1034743 AB6K15_RS10315 WP_007409910.1 2152185..2153297(-) (recF) [Bacillus velezensis strain BC248L1-1]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGTLVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1034743 AB6K15_RS10315 WP_007409910.1 2152185..2153297(-) (recF) [Bacillus velezensis strain BC248L1-1]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAAGGCAAAACCAATCTGATGGAAGCCATCTATGTCCTTTCGATGGCAAAATCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGAAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGGAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACTATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAAACGTCTGCAGTTTACGGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACGTACGGTTCGCAGGGACAGCAGCGTACGACGGCTTTGT
CTTTGAAGCTGGCCGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACAAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTACGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.324	100	0.943