Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AB6K15_RS06015 Genome accession   NZ_CP166492
Coordinates   1300178..1300969 (-) Length   263 a.a.
NCBI ID   WP_407968063.1    Uniprot ID   -
Organism   Bacillus velezensis strain BC248L1-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1295178..1305969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6K15_RS05975 (AB6K15_05975) - 1295447..1295782 (-) 336 WP_070081524.1 SdpI family protein -
  AB6K15_RS05980 (AB6K15_05980) - 1295868..1296395 (-) 528 WP_070081523.1 SH3 domain-containing protein -
  AB6K15_RS05985 (AB6K15_05985) - 1296527..1296796 (-) 270 WP_003155492.1 YfhJ family protein -
  AB6K15_RS05990 (AB6K15_05990) - 1296920..1297072 (+) 153 WP_003155495.1 small, acid-soluble spore protein K -
  AB6K15_RS05995 (AB6K15_05995) - 1297217..1298128 (+) 912 WP_003155497.1 serine protease -
  AB6K15_RS06000 (AB6K15_06000) - 1298091..1298480 (+) 390 WP_407968062.1 DUF2606 family protein -
  AB6K15_RS06005 (AB6K15_06005) - 1298520..1299713 (-) 1194 WP_025650229.1 MFS transporter -
  AB6K15_RS06010 (AB6K15_06010) - 1299860..1300171 (-) 312 WP_025650230.1 YfhH family protein -
  AB6K15_RS06015 (AB6K15_06015) recX 1300178..1300969 (-) 792 WP_407968063.1 recombination regulator RecX Regulator
  AB6K15_RS06020 (AB6K15_06020) - 1301061..1301960 (+) 900 WP_407968064.1 TIGR01777 family oxidoreductase -
  AB6K15_RS06025 (AB6K15_06025) - 1302018..1302128 (+) 111 WP_003155504.1 YfhE family protein -
  AB6K15_RS06030 (AB6K15_06030) - 1302199..1302390 (+) 192 WP_003155508.1 YfhD family protein -
  AB6K15_RS06035 (AB6K15_06035) - 1302429..1303013 (-) 585 WP_094247140.1 nitroreductase -
  AB6K15_RS06040 (AB6K15_06040) - 1303090..1303974 (-) 885 WP_407968065.1 PhzF family phenazine biosynthesis isomerase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30977.19 Da        Isoelectric Point: 6.5190

>NTDB_id=1034731 AB6K15_RS06015 WP_407968063.1 1300178..1300969(-) (recX) [Bacillus velezensis strain BC248L1-1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDNDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1034731 AB6K15_RS06015 WP_407968063.1 1300178..1300969(-) (recX) [Bacillus velezensis strain BC248L1-1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTACTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAGATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATATCGGATGCGGTCTGAAAAAGAAGTC
CGGGATCACCTGAAGAAAAAAGAAACACCGGACATGGTTATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGTCCTGACGTCCTATTCCGCG
AGCTGAAAGCGAAAGGAATAGACAACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGTTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787

Multiple sequence alignment