Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB6K15_RS03220 Genome accession   NZ_CP166492
Coordinates   782898..783362 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain BC248L1-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 777898..788362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6K15_RS03195 (AB6K15_03195) - 778407..778955 (-) 549 Protein_636 hypothetical protein -
  AB6K15_RS03200 (AB6K15_03200) fadH 779066..779830 (-) 765 WP_076851224.1 2,4-dienoyl-CoA reductase -
  AB6K15_RS03205 (AB6K15_03205) - 779975..780838 (+) 864 WP_146283576.1 metallophosphoesterase -
  AB6K15_RS03210 (AB6K15_03210) - 780913..781407 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  AB6K15_RS03215 (AB6K15_03215) - 781483..782775 (+) 1293 WP_003154621.1 MFS transporter -
  AB6K15_RS03220 (AB6K15_03220) kre 782898..783362 (+) 465 WP_003154622.1 YkyB family protein Regulator
  AB6K15_RS03225 (AB6K15_03225) cheV 783405..784316 (-) 912 WP_003154623.1 chemotaxis protein CheV -
  AB6K15_RS03230 (AB6K15_03230) - 784505..784666 (+) 162 WP_407968046.1 hypothetical protein -
  AB6K15_RS03235 (AB6K15_03235) - 784867..786086 (+) 1220 Protein_644 aminotransferase A -
  AB6K15_RS03240 (AB6K15_03240) - 786062..787882 (-) 1821 WP_407968047.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1034715 AB6K15_RS03220 WP_003154622.1 782898..783362(+) (kre) [Bacillus velezensis strain BC248L1-1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1034715 AB6K15_RS03220 WP_003154622.1 782898..783362(+) (kre) [Bacillus velezensis strain BC248L1-1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment