Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB6K15_RS03120 Genome accession   NZ_CP166492
Coordinates   766901..767497 (-) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain BC248L1-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 761901..772497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6K15_RS03095 (AB6K15_03095) mobB 762274..762795 (-) 522 WP_094031685.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AB6K15_RS03100 (AB6K15_03100) glp 762756..764048 (-) 1293 WP_077391926.1 gephyrin-like molybdotransferase Glp -
  AB6K15_RS03105 (AB6K15_03105) - 764066..765085 (-) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB6K15_RS03110 (AB6K15_03110) - 765137..765739 (-) 603 WP_076424045.1 molybdenum cofactor guanylyltransferase -
  AB6K15_RS03115 (AB6K15_03115) - 765885..766877 (+) 993 WP_043021218.1 hypothetical protein -
  AB6K15_RS03120 (AB6K15_03120) rok 766901..767497 (-) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  AB6K15_RS03125 (AB6K15_03125) - 767950..768408 (-) 459 WP_038463805.1 TlpA disulfide reductase family protein -
  AB6K15_RS03130 (AB6K15_03130) - 768696..769502 (+) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  AB6K15_RS03135 (AB6K15_03135) - 769536..769781 (-) 246 WP_003154596.1 YkuS family protein -
  AB6K15_RS03140 (AB6K15_03140) - 769842..770966 (-) 1125 WP_038463797.1 N-acetyldiaminopimelate deacetylase -
  AB6K15_RS03145 (AB6K15_03145) dapD 771037..771747 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB6K15_RS03150 (AB6K15_03150) - 771829..772284 (-) 456 WP_038463794.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1034714 AB6K15_RS03120 WP_012117447.1 766901..767497(-) (rok) [Bacillus velezensis strain BC248L1-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1034714 AB6K15_RS03120 WP_012117447.1 766901..767497(-) (rok) [Bacillus velezensis strain BC248L1-1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTTCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment