Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AB6911_RS06245 Genome accession   NZ_CP166481
Coordinates   1240897..1241553 (+) Length   218 a.a.
NCBI ID   WP_003327576.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain globigii     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1235897..1246553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6911_RS06215 (AB6911_06200) oppF 1236119..1237036 (+) 918 WP_003327583.1 oligopeptide ABC transporter ATP-binding protein OppF -
  AB6911_RS06220 (AB6911_06205) - 1237128..1237370 (+) 243 WP_003327582.1 hypothetical protein -
  AB6911_RS06225 (AB6911_06210) - 1237434..1238615 (+) 1182 WP_034718362.1 putative glycoside hydrolase -
  AB6911_RS06230 (AB6911_06215) - 1238765..1239343 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  AB6911_RS06235 (AB6911_06220) spx 1239524..1239919 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  AB6911_RS06240 (AB6911_06225) - 1239955..1240617 (-) 663 WP_003327577.1 TerC family protein -
  AB6911_RS06245 (AB6911_06230) mecA 1240897..1241553 (+) 657 WP_003327576.1 adaptor protein MecA Regulator
  AB6911_RS06250 (AB6911_06235) coiA 1241713..1242876 (+) 1164 WP_003327575.1 competence protein CoiA family protein Machinery gene
  AB6911_RS06255 (AB6911_06240) pepF 1243105..1244934 (+) 1830 WP_003327574.1 oligoendopeptidase F -
  AB6911_RS06260 (AB6911_06245) - 1244970..1245137 (-) 168 WP_003327573.1 hypothetical protein -
  AB6911_RS06265 (AB6911_06250) spxH 1245453..1246355 (-) 903 WP_003327572.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26004.74 Da        Isoelectric Point: 3.9956

>NTDB_id=1034654 AB6911_RS06245 WP_003327576.1 1240897..1241553(+) (mecA) [Bacillus atrophaeus strain globigii]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTYESSISIHRIEEYGKLIISEDVLNTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=1034654 AB6911_RS06245 WP_003327576.1 1240897..1241553(+) (mecA) [Bacillus atrophaeus strain globigii]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACATA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGAATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927

Multiple sequence alignment