Detailed information NTG1034650

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB6911_RS06130
• Genome accession: NZ_CP166481
• Coordinates: 1218197..1219150 (+)
• Length: 317 a.a.
• NCBI ID: WP_013390469.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain globigii
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1213197..1224150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6911_RS06105 (AB6911_06090)	argF	1215001..1215971 (+)	971	Protein_1147	ornithine carbamoyltransferase	-
AB6911_RS06110 (AB6911_06095)	-	1216053..1216232 (+)	180	WP_003327605.1	YjzC family protein	-
AB6911_RS06115 (AB6911_06100)	-	1216262..1216450 (-)	189	WP_003327604.1	YjzD family protein	-
AB6911_RS06120 (AB6911_06105)	-	1216710..1217444 (+)	735	WP_003327603.1	hypothetical protein	-
AB6911_RS06125 (AB6911_06110)	-	1217532..1218107 (+)	576	WP_003327602.1	hypothetical protein	-
AB6911_RS06130 (AB6911_06115)	med	1218197..1219150 (+)	954	WP_013390469.1	BMP family ABC transporter substrate-binding protein	Regulator
AB6911_RS06135 (AB6911_06120)	comZ	1219165..1219356 (+)	192	WP_003327599.1	ComZ family protein	Regulator
AB6911_RS06140 (AB6911_06125)	-	1219386..1219613 (-)	228	WP_003327598.1	hypothetical protein	-
AB6911_RS06145 (AB6911_06130)	fabH	1219785..1220723 (+)	939	WP_003327597.1	beta-ketoacyl-ACP synthase III	-
AB6911_RS06150 (AB6911_06135)	fabF	1220745..1221983 (+)	1239	WP_003327596.1	beta-ketoacyl-ACP synthase II	-
AB6911_RS06155 (AB6911_06140)	-	1222061..1222846 (+)	786	WP_003327595.1	DUF2268 domain-containing protein	-
AB6911_RS06160 (AB6911_06145)	-	1223036..1224021 (+)	986	Protein_1158	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35399.84 Da
• Isoelectric Point: 4.4404

>NTDB_id=1034650 AB6911_RS06130 WP_013390469.1 1218197..1219150(+) (med) [Bacillus atrophaeus strain globigii]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLSIQSAYNVDVYYKEGVKTDEDILNAIED
YHKRGINLLFGHGSEYEEMFNLVSEDYPDMEFVISNAESKADNVTSVHLNGEAMGFFGGMTAAHMSKTNQIGVIASFKWQ
PEVDGFIKGAKYENPDITINTKYTDHWDDDTTAVKLYEKIKEEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDQ
GENTVLTSTVQNVDKAYGIIAEQYSKGTLESGDHYFDFKDHVVEMGTFSPLVDKAFQDKIAALIKTYNQTDELPKKE

Nucleotide

• Length: 954 bp

>NTDB_id=1034650 AB6911_RS06130 WP_013390469.1 1218197..1219150(+) (med) [Bacillus atrophaeus strain globigii]
ATGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTGTTACTGAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGTATGCTCTTTCCCGATACCATCAATGATCTAGTGTGGGGAACAAAAGGGTATAAAGGTTTACTAAGTA
TACAATCTGCATATAATGTCGACGTCTACTATAAAGAAGGCGTTAAGACTGATGAGGATATATTAAACGCCATTGAAGAT
TACCACAAGAGAGGGATAAACCTTCTTTTTGGCCATGGCAGTGAATACGAAGAAATGTTTAATCTGGTCAGTGAGGATTA
CCCGGACATGGAATTTGTCATTTCTAACGCGGAATCAAAAGCCGACAACGTCACAAGCGTTCATCTTAACGGAGAAGCGA
TGGGGTTTTTCGGCGGGATGACAGCCGCACATATGTCCAAAACCAATCAAATCGGCGTGATTGCTTCTTTTAAATGGCAG
CCTGAAGTAGACGGCTTCATCAAAGGGGCCAAGTATGAAAATCCGGACATCACTATCAATACGAAATATACAGACCACTG
GGATGACGATACCACAGCCGTGAAGCTTTATGAGAAGATAAAAGAGGAAGGCGCGGATGTTGTATATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAACAAATTAAAAAAGACGGTCTCTATGCGATCGGCTATGTTACAGACCAGTCTGATCAG
GGCGAAAATACCGTTTTGACAAGCACTGTTCAAAATGTGGACAAGGCCTATGGCATCATAGCCGAGCAATACAGCAAGGG
CACTTTGGAAAGCGGAGATCACTATTTCGATTTTAAAGATCATGTCGTTGAAATGGGGACATTCAGTCCTCTTGTCGACA
AAGCCTTCCAAGATAAAATTGCCGCTCTTATCAAAACGTATAATCAAACAGATGAACTGCCGAAAAAAGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	87.697	100	0.877