Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AB6911_RS02015 Genome accession   NZ_CP166481
Coordinates   401391..401531 (+) Length   46 a.a.
NCBI ID   WP_223251813.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain globigii     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 396391..406531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6911_RS02010 (AB6911_02000) - 398258..401350 (+) 3093 Protein_362 amino acid adenylation domain-containing protein -
  AB6911_RS02015 (AB6911_02005) comS 401391..401531 (+) 141 WP_223251813.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5368.32 Da        Isoelectric Point: 10.0132

>NTDB_id=1034637 AB6911_RS02015 WP_223251813.1 401391..401531(+) (comS) [Bacillus atrophaeus strain globigii]
MNRYSKRLIKSIILYPRPSEGCISSISLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1034637 AB6911_RS02015 WP_223251813.1 401391..401531(+) (comS) [Bacillus atrophaeus strain globigii]
TTGAACCGATACAGCAAGCGCCTTATCAAGAGCATTATCCTGTATCCTCGGCCCAGCGAAGGATGTATATCCTCAATCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

80.435

100

0.804

Multiple sequence alignment