Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DXE57_RS13785 Genome accession   NZ_LT992476
Coordinates   2652950..2653795 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 21_LA_436     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2647950..2658795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE57_RS15325 - 2648205..2648481 (+) 277 Protein_2574 site-specific integrase -
  DXE57_RS15515 - 2648474..2648701 (+) 228 Protein_2575 Abi family protein -
  DXE57_RS13745 rpsR 2648938..2649180 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  DXE57_RS13750 ssbA 2649232..2649735 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  DXE57_RS13755 rpsF 2649756..2650052 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  DXE57_RS13765 - 2650296..2650487 (+) 192 WP_001052481.1 hypothetical protein -
  DXE57_RS13770 ychF 2650573..2651670 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  DXE57_RS13775 - 2651682..2651885 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  DXE57_RS13780 - 2651915..2652796 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  DXE57_RS13785 spo0J 2652950..2653795 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  DXE57_RS13795 - 2654459..2655562 (+) 1104 WP_031795560.1 PLP-dependent transferase -
  DXE57_RS13800 metC 2655559..2656719 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  DXE57_RS13805 - 2656688..2658529 (+) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=1034588 DXE57_RS13785 WP_001825659.1 2652950..2653795(-) (spo0J) [Staphylococcus aureus isolate 21_LA_436]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1034588 DXE57_RS13785 WP_001825659.1 2652950..2653795(-) (spo0J) [Staphylococcus aureus isolate 21_LA_436]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381