Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXE57_RS12190 Genome accession   NZ_LT992476
Coordinates   2348334..2349008 (-) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 21_LA_436     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2343334..2354008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE57_RS12175 - 2344514..2346403 (-) 1890 WP_000009400.1 FtsX-like permease family protein -
  DXE57_RS12180 vraF 2346393..2347154 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  DXE57_RS12185 graS 2347301..2348341 (-) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  DXE57_RS12190 braR 2348334..2349008 (-) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  DXE57_RS12195 graX 2349024..2349947 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  DXE57_RS12200 - 2350060..2350566 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  DXE57_RS12205 - 2350774..2351202 (-) 429 WP_000198503.1 hypothetical protein -
  DXE57_RS12215 - 2351532..2352575 (-) 1044 WP_001030759.1 alpha/beta hydrolase -
  DXE57_RS12220 - 2352726..2353793 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=1034580 DXE57_RS12190 WP_001166506.1 2348334..2349008(-) (braR) [Staphylococcus aureus isolate 21_LA_436]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1034580 DXE57_RS12190 WP_001166506.1 2348334..2349008(-) (braR) [Staphylococcus aureus isolate 21_LA_436]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411