Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABK096_RS15700 Genome accession   NZ_CP166455
Coordinates   3394431..3394832 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain a6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3389431..3399832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABK096_RS15685 (ABK096_15680) - 3391442..3393478 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  ABK096_RS15690 (ABK096_15685) - 3393520..3394050 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  ABK096_RS15695 (ABK096_15690) - 3394050..3394412 (-) 363 WP_005410717.1 PleD family two-component system response regulator -
  ABK096_RS15700 (ABK096_15695) pilG 3394431..3394832 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  ABK096_RS15705 (ABK096_15700) gshB 3395073..3396020 (+) 948 WP_049395795.1 glutathione synthase -
  ABK096_RS15710 (ABK096_15705) - 3396020..3396904 (+) 885 WP_005410719.1 energy transducer TonB -
  ABK096_RS15715 (ABK096_15710) tsaB 3397473..3398186 (-) 714 WP_012481047.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=1034570 ABK096_RS15700 WP_005418455.1 3394431..3394832(-) (pilG) [Stenotrophomonas maltophilia strain a6]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1034570 ABK096_RS15700 WP_005418455.1 3394431..3394832(-) (pilG) [Stenotrophomonas maltophilia strain a6]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment