Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AB9X52_RS07915 Genome accession   NZ_CP166433
Coordinates   1672121..1672747 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain 2024CK-00699     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1667121..1677747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9X52_RS07895 (AB9X52_07905) - 1667520..1669280 (-) 1761 WP_375602917.1 AAA family ATPase -
  AB9X52_RS07900 (AB9X52_07910) matP 1669467..1669919 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  AB9X52_RS07905 (AB9X52_07915) ompA 1669985..1671037 (-) 1053 WP_108376575.1 porin OmpA -
  AB9X52_RS07910 (AB9X52_07920) sulA 1671394..1671903 (-) 510 WP_026080726.1 SOS-induced cell division inhibitor SulA -
  AB9X52_RS07915 (AB9X52_07925) sxy/tfoX 1672121..1672747 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  AB9X52_RS07920 (AB9X52_07930) yccS 1672704..1674866 (-) 2163 WP_375602918.1 YccS family putative transporter -
  AB9X52_RS07925 (AB9X52_07935) - 1674885..1675331 (-) 447 WP_003858149.1 YccF domain-containing protein -
  AB9X52_RS07930 (AB9X52_07940) helD 1675454..1677508 (+) 2055 WP_375602919.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1034438 AB9X52_RS07915 WP_017384804.1 1672121..1672747(+) (sxy/tfoX) [Enterobacter hormaechei strain 2024CK-00699]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1034438 AB9X52_RS07915 WP_017384804.1 1672121..1672747(+) (sxy/tfoX) [Enterobacter hormaechei strain 2024CK-00699]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCACCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCAATGGTGTCTGACGGCGAGCTTTATCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAGCGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCTGCCAG
GAAAGAGCGATACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAATCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTGCGACAGCTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment