Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AB9X40_RS15945 Genome accession   NZ_CP166432
Coordinates   3307817..3308440 (-) Length   207 a.a.
NCBI ID   WP_047076308.1    Uniprot ID   -
Organism   Klebsiella aerogenes strain 2022CK-00751     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3302817..3313440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9X40_RS15930 (AB9X40_15930) helD 3303052..3305106 (-) 2055 WP_047076249.1 DNA helicase IV -
  AB9X40_RS15935 (AB9X40_15935) - 3305230..3305676 (+) 447 WP_020079238.1 YccF domain-containing protein -
  AB9X40_RS15940 (AB9X40_15940) yccS 3305694..3307829 (+) 2136 WP_015367427.1 YccS family putative transporter -
  AB9X40_RS15945 (AB9X40_15945) sxy/tfoX 3307817..3308440 (-) 624 WP_047076308.1 TfoX/Sxy family DNA transformation protein Regulator
  AB9X40_RS15950 (AB9X40_15950) sulA 3308890..3309399 (+) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  AB9X40_RS15955 (AB9X40_15955) ompA 3309752..3310804 (+) 1053 WP_015704908.1 porin OmpA -
  AB9X40_RS15960 (AB9X40_15960) matP 3310896..3311348 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  AB9X40_RS15965 (AB9X40_15965) - 3311534..3313291 (+) 1758 WP_047076248.1 Lon protease family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23582.30 Da        Isoelectric Point: 9.7408

>NTDB_id=1034424 AB9X40_RS15945 WP_047076308.1 3307817..3308440(-) (sxy/tfoX) [Klebsiella aerogenes strain 2022CK-00751]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLIMRKNGRPVALK
YYRIDEALWQDSKMLFHLSELSLHTARSEKQHQRNSGRLKDLPNISFHMELMLIHAGITDVKMLRTLGAEMSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYGVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1034424 AB9X40_RS15945 WP_047076308.1 3307817..3308440(-) (sxy/tfoX) [Klebsiella aerogenes strain 2022CK-00751]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCATAGCCCGATGTTAATCATGCGCAAAAATGGTCGGCCGGTGGCGCTAAAA
TACTATCGTATAGATGAAGCACTGTGGCAGGACAGTAAAATGCTGTTTCACCTGTCAGAGCTGTCATTGCATACGGCGCG
TAGCGAAAAGCAGCATCAGCGTAATTCCGGCAGGCTAAAGGATTTGCCTAATATCAGCTTTCACATGGAATTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTGGGGGCGGAAATGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACGCAAGGATACGGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

52.792

95.169

0.502

Multiple sequence alignment