Detailed information NTG0103417

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: STAB1101_RS04265
• Genome accession: NZ_CP007240
• Coordinates: 855057..856127 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain 7F7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 850057..861127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STAB1101_RS04245 (STAB1101_04245)	citX	850638..851216 (+)	579	WP_011054513.1	citrate lyase holo-[acyl-carrier protein] synthase	-
STAB1101_RS04250 (STAB1101_04250)	-	851231..852625 (+)	1395	WP_014635474.1	oxaloacetate decarboxylase subunit alpha	-
STAB1101_RS04255 (STAB1101_04255)	citC	852735..853787 (-)	1053	WP_002991776.1	[citrate (pro-3S)-lyase] ligase	-
STAB1101_RS04260 (STAB1101_04260)	-	853876..854358 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
STAB1101_RS04265 (STAB1101_04265)	xerS	855057..856127 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
STAB1101_RS04270 (STAB1101_04270)	-	856597..857295 (+)	699	WP_014635476.1	XRE family transcriptional regulator	-
STAB1101_RS04275 (STAB1101_04275)	ffh	857430..858992 (-)	1563	WP_002993302.1	signal recognition particle protein	-
STAB1101_RS04280 (STAB1101_04280)	-	859007..859339 (-)	333	WP_002989745.1	putative DNA-binding protein	-
STAB1101_RS04285 (STAB1101_04285)	-	859437..860135 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=103417 STAB1101_RS04265 WP_002984598.1 855057..856127(-) (xerS) [Streptococcus pyogenes strain 7F7]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=103417 STAB1101_RS04265 WP_002984598.1 855057..856127(-) (xerS) [Streptococcus pyogenes strain 7F7]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806