Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXE46_RS04075 Genome accession   NZ_LT992471
Coordinates   800441..801115 (+) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 17_LA_343     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 795441..806115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE46_RS04045 - 795656..796723 (+) 1068 WP_000980142.1 membrane protein -
  DXE46_RS04050 - 796874..797917 (+) 1044 WP_001030759.1 alpha/beta hydrolase -
  DXE46_RS04060 - 798247..798675 (+) 429 WP_000198503.1 hypothetical protein -
  DXE46_RS04065 - 798883..799389 (-) 507 WP_000940128.1 GNAT family N-acetyltransferase -
  DXE46_RS04070 graX 799502..800425 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  DXE46_RS04075 braR 800441..801115 (+) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  DXE46_RS04080 graS 801108..802148 (+) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  DXE46_RS04085 vraF 802295..803056 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  DXE46_RS04090 - 803046..804935 (+) 1890 WP_000009400.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=1034074 DXE46_RS04075 WP_001166506.1 800441..801115(+) (braR) [Staphylococcus aureus isolate 17_LA_343]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1034074 DXE46_RS04075 WP_001166506.1 800441..801115(+) (braR) [Staphylococcus aureus isolate 17_LA_343]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411