Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DXE46_RS00390 Genome accession   NZ_LT992471
Coordinates   80077..80877 (+) Length   266 a.a.
NCBI ID   WP_001807805.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 17_LA_343     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 75077..85877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE46_RS00375 walK 75747..77573 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  DXE46_RS00380 yycH 77566..78900 (+) 1335 WP_001060144.1 two-component system activity regulator YycH -
  DXE46_RS00385 - 78901..79689 (+) 789 WP_001104170.1 two-component system regulatory protein YycI -
  DXE46_RS00390 vicX 80077..80877 (+) 801 WP_001807805.1 MBL fold metallo-hydrolase Regulator
  DXE46_RS00395 adsA 81104..83425 (+) 2322 WP_000645765.1 LPXTG-anchored adenosine synthase AdsA -
  DXE46_RS00400 rlmH 83791..84270 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DXE46_RS00405 - 84592..85847 (+) 1256 Protein_73 MrcB family domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.56 Da        Isoelectric Point: 6.5000

>NTDB_id=1034065 DXE46_RS00390 WP_001807805.1 80077..80877(+) (vicX) [Staphylococcus aureus isolate 17_LA_343]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIKDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1034065 DXE46_RS00390 WP_001807805.1 80077..80877(+) (vicX) [Staphylococcus aureus isolate 17_LA_343]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTAAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATTCCTATGGATCAGAAATTTATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment