Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DXE64_RS06990 Genome accession   NZ_LT992470
Coordinates   1364914..1365759 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 13_LA_301     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359914..1370759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE64_RS15010 - 1360169..1360445 (+) 277 Protein_1287 site-specific integrase -
  DXE64_RS15255 - 1360438..1360665 (+) 228 Protein_1288 Abi family protein -
  DXE64_RS06950 rpsR 1360902..1361144 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  DXE64_RS06955 ssbA 1361196..1361699 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  DXE64_RS06960 rpsF 1361720..1362016 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  DXE64_RS06970 - 1362260..1362451 (+) 192 WP_001052481.1 hypothetical protein -
  DXE64_RS06975 ychF 1362537..1363634 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  DXE64_RS06980 - 1363646..1363849 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  DXE64_RS06985 - 1363879..1364760 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  DXE64_RS06990 spo0J 1364914..1365759 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  DXE64_RS07000 - 1366423..1367526 (+) 1104 WP_031795560.1 PLP-dependent transferase -
  DXE64_RS07005 metC 1367523..1368683 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  DXE64_RS07010 - 1368652..1370493 (+) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=1034036 DXE64_RS06990 WP_001825659.1 1364914..1365759(-) (spo0J) [Staphylococcus aureus isolate 13_LA_301]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1034036 DXE64_RS06990 WP_001825659.1 1364914..1365759(-) (spo0J) [Staphylococcus aureus isolate 13_LA_301]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381

Multiple sequence alignment