Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXE64_RS05390 Genome accession   NZ_LT992470
Coordinates   1059300..1059974 (-) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 13_LA_301     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1054300..1064974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE64_RS05375 - 1055480..1057369 (-) 1890 WP_000009400.1 FtsX-like permease family protein -
  DXE64_RS05380 vraF 1057359..1058120 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  DXE64_RS05385 graS 1058267..1059307 (-) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  DXE64_RS05390 braR 1059300..1059974 (-) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  DXE64_RS05395 graX 1059990..1060913 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  DXE64_RS05400 - 1061026..1061532 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  DXE64_RS05405 - 1061740..1062168 (-) 429 WP_000198503.1 hypothetical protein -
  DXE64_RS05415 - 1062498..1063541 (-) 1044 WP_001030759.1 alpha/beta hydrolase -
  DXE64_RS05420 - 1063692..1064759 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=1034028 DXE64_RS05390 WP_001166506.1 1059300..1059974(-) (braR) [Staphylococcus aureus isolate 13_LA_301]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1034028 DXE64_RS05390 WP_001166506.1 1059300..1059974(-) (braR) [Staphylococcus aureus isolate 13_LA_301]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411

Multiple sequence alignment