Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   QUE82_RS12765 Genome accession   NZ_AP028059
Coordinates   2385502..2385675 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 2380502..2390675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS12750 (BSNN_25020) gcvT 2381301..2382389 (-) 1089 WP_014480247.1 glycine cleavage system aminomethyltransferase GcvT -
  QUE82_RS12755 (BSNN_25030) hepAA 2382831..2384504 (+) 1674 WP_014480248.1 SNF2-related protein -
  QUE82_RS12760 (BSNN_25040) yqhG 2384525..2385319 (+) 795 WP_014480249.1 YqhG family protein -
  QUE82_RS12765 (BSNN_25050) sinI 2385502..2385675 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  QUE82_RS12770 (BSNN_25060) sinR 2385709..2386044 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  QUE82_RS12775 (BSNN_25070) tasA 2386137..2386922 (-) 786 WP_014480250.1 biofilm matrix protein TasA -
  QUE82_RS12780 (BSNN_25080) sipW 2386986..2387558 (-) 573 WP_003230181.1 signal peptidase I SipW -
  QUE82_RS12785 (BSNN_25090) tapA 2387542..2388303 (-) 762 WP_014480251.1 amyloid fiber anchoring/assembly protein TapA -
  QUE82_RS12790 (BSNN_25100) yqzG 2388575..2388901 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  QUE82_RS12795 (BSNN_25110) spoIITA 2388943..2389122 (-) 180 WP_014480252.1 YqzE family protein -
  QUE82_RS12800 (BSNN_25120) comGG 2389193..2389567 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  QUE82_RS12805 (BSNN_25130) comGF 2389568..2389951 (-) 384 WP_014480254.1 ComG operon protein ComGF Machinery gene
  QUE82_RS12810 (BSNN_25140) comGE 2389977..2390324 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=103399 QUE82_RS12765 WP_003230187.1 2385502..2385675(+) (sinI) [Bacillus subtilis subsp. natto strain NARUSE]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=103399 QUE82_RS12765 WP_003230187.1 2385502..2385675(+) (sinI) [Bacillus subtilis subsp. natto strain NARUSE]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment