Detailed information NTG1033955

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: SD311_RS07305
• Genome accession: NZ_CP166245
• Coordinates: 1552251..1553225 (-)
• Length: 324 a.a.
• NCBI ID: WP_119604185.1
• Uniprot ID: -
• Organism: Staphylococcus sp. KG4-3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1547251..1558225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD311_RS07275 (SD311_007275)	gcvT	1547792..1548883 (-)	1092	WP_107552363.1	glycine cleavage system aminomethyltransferase GcvT	-
SD311_RS07280 (SD311_007280)	-	1549070..1549543 (-)	474	WP_051035296.1	shikimate kinase	-
SD311_RS07285 (SD311_007285)	comGF	1549750..1550193 (-)	444	WP_119604246.1	competence type IV pilus minor pilin ComGF	-
SD311_RS07290 (SD311_007290)	comGD	1550451..1550894 (-)	444	WP_259339173.1	competence type IV pilus minor pilin ComGD	-
SD311_RS07295 (SD311_007295)	comGC	1550875..1551192 (-)	318	WP_017724578.1	competence type IV pilus major pilin ComGC	Machinery gene
SD311_RS07300 (SD311_007300)	comGB	1551212..1552279 (-)	1068	WP_119604186.1	competence type IV pilus assembly protein ComGB	-
SD311_RS07305 (SD311_007305)	comGA	1552251..1553225 (-)	975	WP_119604185.1	competence type IV pilus ATPase ComGA	Machinery gene
SD311_RS07310 (SD311_007310)	-	1553323..1553946 (-)	624	WP_119604184.1	MBL fold metallo-hydrolase	-
SD311_RS07315 (SD311_007315)	-	1553948..1554271 (-)	324	WP_029377188.1	MTH1187 family thiamine-binding protein	-
SD311_RS07320 (SD311_007320)	-	1554271..1555257 (-)	987	WP_017724583.1	glucokinase	-
SD311_RS07325 (SD311_007325)	-	1555643..1555840 (-)	198	WP_026113590.1	YqgQ family protein	-
SD311_RS07330 (SD311_007330)	-	1555824..1557281 (-)	1458	WP_017724585.1	rhomboid family intramembrane serine protease	-
SD311_RS07335 (SD311_007335)	-	1557293..1557835 (-)	543	WP_318757974.1	5-formyltetrahydrofolate cyclo-ligase	-
SD311_RS07340 (SD311_007340)	rpmG	1557966..1558115 (-)	150	WP_002483181.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37232.56 Da
• Isoelectric Point: 9.5974

>NTDB_id=1033955 SD311_RS07305 WP_119604185.1 1552251..1553225(-) (comGA) [Staphylococcus sp. KG4-3]
MKLLFNSMIEKAINKDASDIHFIPVDKEVLIKFRIRDDLKSIETLQLNTYFKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQHFQKQKHNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKEHLNLN
IITIEDPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSIISILNQRLITTKEGVRELVYEQVKKEDIYHFFKNSYTLPKDFHNLSYKLNKMSKEGMICETSM
ERYL

Nucleotide

• Length: 975 bp

>NTDB_id=1033955 SD311_RS07305 WP_119604185.1 1552251..1553225(-) (comGA) [Staphylococcus sp. KG4-3]
TTGAAGTTATTGTTTAATAGTATGATTGAAAAGGCAATTAATAAAGATGCATCAGATATACATTTTATTCCTGTAGATAA
AGAAGTTTTGATTAAATTTAGAATCCGTGATGATTTGAAATCAATAGAAACATTACAATTAAATACGTATTTTAAATTAC
TAACTTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACACAACGCTGCTCAGAGTGGTAGGTATATTTATAAATTA
AAACAAATTTATTTCCTTAGAATATCAACGCTTCCTTTATCTCTAGGAAATGAAAGCTGCGTTATTAGGATTATCCCGCA
ACATTTTCAAAAGCAAAAACATAACCAAAACATAACGCATTTATATAATCTAATGAACAAAAAGCAAGGATTAATTTTAT
TGAGTGGACCCACTGGTTCTGGAAAAAGTACGTTAATGTATCACATGTTGTCTTATGCTAAAGAGCACTTAAATTTAAAT
ATAATTACAATTGAAGATCCCGTTGAACAATTGATAAATGGTATAACTCAAATATCATTGAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCAATATTGCGATGCGATCCAGATATTATTTTAATTGGTGAAATAAGAGATGCAAATGTAG
CTAAACATGTTATACAAGCCAGTTTAAGTGGCCATTTAGTACTTTCTACAATTCATGCTAGTAATTGTAAAGGTGTGATA
TTAAGACTGTTAGAAATGGGGATAACAGTACAACAGCTTATACAATCAATCATTAGTATATTAAATCAAAGGCTTATTAC
TACTAAAGAAGGTGTTAGGGAACTTGTATATGAACAGGTAAAAAAAGAAGATATTTATCATTTCTTTAAAAATAGTTATA
CATTACCCAAAGATTTCCATAACTTATCTTATAAGTTAAACAAAATGTCAAAAGAGGGGATGATATGTGAAACATCGATG
GAACGTTATCTATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	63.58	100	0.636
comGA	Staphylococcus aureus N315	63.58	100	0.636