Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AB9B68_RS16150 Genome accession   NZ_CP166224
Coordinates   3320612..3321235 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain 2021CK-01796     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3315612..3326235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9B68_RS16135 (AB9B68_16135) helD 3315847..3317901 (-) 2055 WP_048228616.1 DNA helicase IV -
  AB9B68_RS16140 (AB9B68_16140) - 3318025..3318471 (+) 447 WP_047056215.1 YccF domain-containing protein -
  AB9B68_RS16145 (AB9B68_16145) yccS 3318489..3320624 (+) 2136 WP_015367427.1 YccS family putative transporter -
  AB9B68_RS16150 (AB9B68_16150) sxy/tfoX 3320612..3321235 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  AB9B68_RS16155 (AB9B68_16155) sulA 3321685..3322194 (+) 510 WP_048228615.1 SOS-induced cell division inhibitor SulA -
  AB9B68_RS16160 (AB9B68_16160) ompA 3322547..3323599 (+) 1053 WP_015704908.1 porin OmpA -
  AB9B68_RS16165 (AB9B68_16165) matP 3323691..3324143 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  AB9B68_RS16170 (AB9B68_16170) - 3324329..3326086 (+) 1758 WP_048228614.1 Lon protease family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=1033835 AB9B68_RS16150 WP_026612357.1 3320612..3321235(-) (sxy/tfoX) [Klebsiella aerogenes strain 2021CK-01796]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=1033835 AB9B68_RS16150 WP_026612357.1 3320612..3321235(-) (sxy/tfoX) [Klebsiella aerogenes strain 2021CK-01796]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment