Detailed information NTG0103380

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QUE82_RS06300
• Genome accession: NZ_AP028059
• Coordinates: 1218726..1219679 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain NARUSE
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1213726..1224679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE82_RS06270 (BSNN_11850)	argF	1214268..1215227 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
QUE82_RS06280 (BSNN_11880)	yjzC	1216603..1216782 (+)	180	WP_003245356.1	YjzC family protein	-
QUE82_RS06285 (BSNN_11890)	yjzD	1216828..1217013 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
QUE82_RS06290 (BSNN_11900)	-	1217262..1217996 (+)	735	WP_014479433.1	hypothetical protein	-
QUE82_RS06295 (BSNN_11910)	-	1218078..1218635 (+)	558	WP_014479435.1	hypothetical protein	-
QUE82_RS06300 (BSNN_11920)	med	1218726..1219679 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
QUE82_RS06305 (BSNN_11930)	comZ	1219694..1219885 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
QUE82_RS06310 (BSNN_11940)	yjzB	1219915..1220142 (-)	228	WP_031600361.1	spore coat protein YjzB	-
QUE82_RS06315 (BSNN_11950)	fabH	1220307..1221245 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
QUE82_RS06320 (BSNN_11960)	fabF	1221268..1222509 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
QUE82_RS06325 (BSNN_11970)	yjaZ	1222585..1223370 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
QUE82_RS06330 (BSNN_11980)	appD	1223562..1224548 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=103380 QUE82_RS06300 WP_014479436.1 1218726..1219679(+) (med) [Bacillus subtilis subsp. natto strain NARUSE]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=103380 QUE82_RS06300 WP_014479436.1 1218726..1219679(+) (med) [Bacillus subtilis subsp. natto strain NARUSE]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994