Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB5I78_RS27430 Genome accession   NZ_CP166199
Coordinates   5914000..5914407 (-) Length   135 a.a.
NCBI ID   WP_106575669.1    Uniprot ID   A0A7M1KEX5
Organism   Pseudomonas sp. N2-3-1-14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5909000..5919407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5I78_RS27415 - 5911003..5913054 (-) 2052 WP_145157715.1 methyl-accepting chemotaxis protein -
  AB5I78_RS27420 - 5913051..5913575 (-) 525 WP_119737459.1 chemotaxis protein CheW -
  AB5I78_RS27425 pilH 5913588..5913953 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  AB5I78_RS27430 pilG 5914000..5914407 (-) 408 WP_106575669.1 twitching motility response regulator PilG Regulator
  AB5I78_RS27435 gshB 5914647..5915600 (+) 954 WP_099550340.1 glutathione synthase -
  AB5I78_RS27440 - 5915678..5916583 (+) 906 WP_369301959.1 energy transducer TonB -
  AB5I78_RS27445 - 5916842..5917411 (+) 570 WP_106575672.1 YqgE/AlgH family protein -
  AB5I78_RS27450 ruvX 5917411..5917848 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  AB5I78_RS27455 pyrR 5917921..5918427 (+) 507 WP_106575674.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.46 Da        Isoelectric Point: 7.3843

>NTDB_id=1033698 AB5I78_RS27430 WP_106575669.1 5914000..5914407(-) (pilG) [Pseudomonas sp. N2-3-1-14]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1033698 AB5I78_RS27430 WP_106575669.1 5914000..5914407(-) (pilG) [Pseudomonas sp. N2-3-1-14]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTGGGGTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCACTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAAACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCTACGTGCCCGGCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1KEX5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659

Multiple sequence alignment