Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DXE56_RS03660 Genome accession   NZ_LT992464
Coordinates   662762..663580 (+) Length   272 a.a.
NCBI ID   WP_001124416.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 3_LA_115     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 657762..668580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE56_RS03635 - 658378..658908 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  DXE56_RS03640 yfkAB 659170..660321 (-) 1152 WP_001089599.1 radical SAM/CxCxxxxC motif protein YfkAB -
  DXE56_RS03645 - 660545..660706 (+) 162 WP_001005407.1 SE1561 family protein -
  DXE56_RS03650 - 660836..661351 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  DXE56_RS03655 sgtB 661692..662501 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  DXE56_RS03660 recX 662762..663580 (+) 819 WP_001124416.1 recombination regulator RecX Regulator
  DXE56_RS03665 - 663558..663872 (+) 315 WP_000435806.1 YfhH family protein -
  DXE56_RS03670 - 663887..665404 (+) 1518 WP_000535846.1 ABC transporter ATP-binding protein -
  DXE56_RS03675 - 665413..666249 (+) 837 WP_000886473.1 membrane protein -
  DXE56_RS03685 - 666510..667487 (-) 978 WP_000379101.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32245.07 Da        Isoelectric Point: 5.9190

>NTDB_id=1033461 DXE56_RS03660 WP_001124416.1 662762..663580(+) (recX) [Staphylococcus aureus isolate 3_LA_115]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTDKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=1033461 DXE56_RS03660 WP_001124416.1 662762..663580(+) (recX) [Staphylococcus aureus isolate 3_LA_115]
ATGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGATAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAACAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993