Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DXE29_RS03125 Genome accession   NZ_LT992463
Coordinates   639569..640414 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 2_LA_86     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 634569..645414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXE29_RS03105 - 634835..636676 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  DXE29_RS03110 metC 636645..637805 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  DXE29_RS03115 - 637802..638905 (-) 1104 WP_031795560.1 PLP-dependent transferase -
  DXE29_RS03125 spo0J 639569..640414 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  DXE29_RS03130 - 640568..641449 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  DXE29_RS03135 - 641479..641682 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  DXE29_RS03140 ychF 641694..642791 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  DXE29_RS03145 - 642877..643068 (-) 192 WP_001052481.1 hypothetical protein -
  DXE29_RS03155 rpsF 643312..643608 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  DXE29_RS03160 ssbA 643629..644132 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  DXE29_RS03165 rpsR 644184..644426 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  DXE29_RS15045 - 644663..644890 (-) 228 Protein_607 Abi family protein -
  DXE29_RS14860 - 644883..645159 (-) 277 Protein_608 site-specific integrase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=1033366 DXE29_RS03125 WP_001825659.1 639569..640414(+) (spo0J) [Staphylococcus aureus isolate 2_LA_86]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1033366 DXE29_RS03125 WP_001825659.1 639569..640414(+) (spo0J) [Staphylococcus aureus isolate 2_LA_86]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381