Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB8810_RS06725 Genome accession   NZ_CP166096
Coordinates   1574985..1575386 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sp. NCPPB 3005     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1569985..1580386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8810_RS06715 (AB8810_06715) - 1572912..1573793 (-) 882 WP_179566492.1 energy transducer TonB -
  AB8810_RS06720 (AB8810_06720) gshB 1573790..1574740 (-) 951 WP_191824312.1 glutathione synthase -
  AB8810_RS06725 (AB8810_06725) pilG 1574985..1575386 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  AB8810_RS06730 (AB8810_06730) - 1575404..1575766 (+) 363 WP_179566488.1 PleD family two-component system response regulator -
  AB8810_RS06735 (AB8810_06735) - 1575768..1576298 (+) 531 WP_179566486.1 chemotaxis protein CheW -
  AB8810_RS06740 (AB8810_06740) - 1576339..1578375 (+) 2037 WP_179566484.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=1033355 AB8810_RS06725 WP_003472648.1 1574985..1575386(+) (pilG) [Xanthomonas sp. NCPPB 3005]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1033355 AB8810_RS06725 WP_003472648.1 1574985..1575386(+) (pilG) [Xanthomonas sp. NCPPB 3005]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGGGTCATGGTGATCGATGACTCGAAGACGATCCGTCG
TACTGCCGAAACGCTGTTGAAGCGCGAGGGGTGTGAGGTGGTCACTGCCACCGACGGCTTCGAGGCCTTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCCCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAACTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment