Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB8814_RS06765 Genome accession   NZ_CP166090
Coordinates   1632137..1632538 (+) Length   133 a.a.
NCBI ID   WP_023904776.1    Uniprot ID   A0AAU0BDV7
Organism   Xanthomonas hydrangeae strain NCPPB 4692     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1627137..1637538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8814_RS06750 (AB8814_06745) tsaB 1628794..1629516 (+) 723 WP_205394076.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  AB8814_RS06755 (AB8814_06755) - 1630078..1630953 (-) 876 WP_023904778.1 energy transducer TonB -
  AB8814_RS06760 (AB8814_06760) gshB 1630950..1631900 (-) 951 WP_205394077.1 glutathione synthase -
  AB8814_RS06765 (AB8814_06765) pilG 1632137..1632538 (+) 402 WP_023904776.1 twitching motility response regulator PilG Regulator
  AB8814_RS06770 (AB8814_06770) - 1632556..1632918 (+) 363 WP_006450735.1 PleD family two-component system response regulator -
  AB8814_RS06775 (AB8814_06775) - 1632918..1633448 (+) 531 WP_205394078.1 chemotaxis protein CheW -
  AB8814_RS06780 (AB8814_06780) - 1633488..1635524 (+) 2037 WP_205394079.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14690.07 Da        Isoelectric Point: 7.1350

>NTDB_id=1033318 AB8814_RS06765 WP_023904776.1 1632137..1632538(+) (pilG) [Xanthomonas hydrangeae strain NCPPB 4692]
MSEHIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1033318 AB8814_RS06765 WP_023904776.1 1632137..1632538(+) (pilG) [Xanthomonas hydrangeae strain NCPPB 4692]
ATGAGTGAACACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGACGATTCGAAGACTATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGAGAAGGGTGTGAAGTAGTGACAGCAACCGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACTCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment