Detailed information NTG1033196

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB8O67_RS10645
• Genome accession: NZ_CP166053
• Coordinates: 2101082..2102212 (+)
• Length: 376 a.a.
• NCBI ID: WP_326139188.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XYK2-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2096082..2107212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O67_RS10610 (AB8O67_10620)	-	2096424..2096656 (+)	233	Protein_2036	hypothetical protein	-
AB8O67_RS10615 (AB8O67_10625)	-	2096784..2097296 (-)	513	WP_044155603.1	GNAT family N-acetyltransferase	-
AB8O67_RS10620 (AB8O67_10630)	-	2097668..2098201 (-)	534	WP_369888583.1	GNAT family N-acetyltransferase	-
AB8O67_RS10625 (AB8O67_10635)	-	2098283..2098690 (-)	408	WP_044155599.1	UPF0715 family protein	-
AB8O67_RS10630 (AB8O67_10640)	-	2098798..2099064 (-)	267	Protein_2040	hypothetical protein	-
AB8O67_RS10635 (AB8O67_10645)	-	2100320..2100580 (+)	261	WP_082687961.1	hypothetical protein	-
AB8O67_RS10640 (AB8O67_10650)	-	2100828..2100917 (+)	90	WP_369888584.1	hypothetical protein	-
AB8O67_RS10645 (AB8O67_10655)	rapC	2101082..2102212 (+)	1131	WP_326139188.1	Rap family tetratricopeptide repeat protein	Regulator
AB8O67_RS10650 (AB8O67_10660)	-	2102202..2102345 (+)	144	WP_162264507.1	hypothetical protein	-
AB8O67_RS10655 (AB8O67_10665)	-	2102392..2102721 (-)	330	Protein_2045	UV damage repair protein UvrX	-
AB8O67_RS10660 (AB8O67_10670)	ppsA	2103016..2105619 (-)	2604	WP_326139185.1	phosphoenolpyruvate synthase	-
AB8O67_RS10665 (AB8O67_10675)	-	2105836..2106279 (-)	444	WP_059336554.1	IS3 family transposase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44463.20 Da
• Isoelectric Point: 5.6781

>NTDB_id=1033196 AB8O67_RS10645 WP_326139188.1 2101082..2102212(+) (rapC) [Bacillus halotolerans strain XYK2-4]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYINAIRSYKMAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAETALHIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIDQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKALILYKKGIERAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSMLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=1033196 AB8O67_RS10645 WP_326139188.1 2101082..2102212(+) (rapC) [Bacillus halotolerans strain XYK2-4]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATTAAACATATGAAGGAAGACCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGCCAAACAAAACTGAAAGGTGTACTAGAATACTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAATGCAATAAGGTCATATAAAATGGCTGAGAAAAAGCTTGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAACAGCCCTTCACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCCCATCTTCAGAGAGCCTTAAAAGACTCAAAAGCCATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGGAACTGTTATTATAAAATGAAAGAGTATGACAAAGCTGCT
GAATATATTGATCAAGCAGTCTCATTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTGATTCTTTATAAAAAAGGAATCGAGAGAGCACAAGCCATAAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTATGCTTAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (221-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	50.798	100	0.508
rapF	Bacillus subtilis subsp. subtilis str. 168	45.119	100	0.455