Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AB8O67_RS04650 Genome accession   NZ_CP166053
Coordinates   906404..907195 (+) Length   263 a.a.
NCBI ID   WP_059291605.1    Uniprot ID   -
Organism   Bacillus halotolerans strain XYK2-4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 901404..912195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8O67_RS04620 (AB8O67_04615) - 902247..903278 (+) 1032 WP_024120642.1 iron chelate uptake ABC transporter family permease subunit -
  AB8O67_RS04625 (AB8O67_04620) - 903394..904272 (+) 879 WP_326139046.1 PhzF family phenazine biosynthesis isomerase -
  AB8O67_RS04630 (AB8O67_04625) - 904360..904944 (+) 585 WP_024120644.1 nitroreductase -
  AB8O67_RS04635 (AB8O67_04630) - 904983..905174 (-) 192 WP_326056880.1 YfhD family protein -
  AB8O67_RS04640 (AB8O67_04635) - 905240..905350 (-) 111 WP_010333447.1 YfhE family protein -
  AB8O67_RS04645 (AB8O67_04640) - 905404..906315 (-) 912 WP_059291606.1 TIGR01777 family oxidoreductase -
  AB8O67_RS04650 (AB8O67_04645) recX 906404..907195 (+) 792 WP_059291605.1 recombination regulator RecX Regulator
  AB8O67_RS04655 (AB8O67_04650) - 907202..907522 (+) 321 WP_059291604.1 YfhH family protein -
  AB8O67_RS04660 (AB8O67_04655) - 907659..908852 (+) 1194 WP_369888489.1 MFS transporter -
  AB8O67_RS04665 (AB8O67_04660) - 908889..909041 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  AB8O67_RS04670 (AB8O67_04665) - 909166..909435 (+) 270 WP_024120650.1 YfhJ family protein -
  AB8O67_RS04675 (AB8O67_04670) - 909471..909854 (-) 384 WP_044163733.1 hypothetical protein -
  AB8O67_RS04680 (AB8O67_04675) - 909856..910068 (-) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -
  AB8O67_RS04685 (AB8O67_04680) - 910261..910779 (+) 519 WP_106295821.1 SH3 domain-containing protein -
  AB8O67_RS04690 (AB8O67_04685) - 910865..911197 (+) 333 WP_044163737.1 SdpI family protein -
  AB8O67_RS04695 (AB8O67_04690) - 911184..912047 (+) 864 WP_202656827.1 alpha/beta fold hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30790.93 Da        Isoelectric Point: 6.0895

>NTDB_id=1033172 AB8O67_RS04650 WP_059291605.1 906404..907195(+) (recX) [Bacillus halotolerans strain XYK2-4]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELTKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSTKEV
EDHLKKKETSAPVITEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1033172 AB8O67_RS04650 WP_059291605.1 906404..907195(+) (recX) [Bacillus halotolerans strain XYK2-4]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAGAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTACAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTA
GAAGACCATTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTACGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTACGTGAGCACTCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATCGATGACGACACCATCAAAGATACACTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGACGAAGATACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGATCAATTTCTGCAGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.255

100

0.913


Multiple sequence alignment