Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AB8O67_RS00245 | Genome accession | NZ_CP166053 |
| Coordinates | 44469..44759 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus halotolerans strain XYK2-4 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39469..49759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8O67_RS00205 (AB8O67_00205) | darA | 39489..39818 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| AB8O67_RS00210 (AB8O67_00210) | - | 39831..40271 (+) | 441 | WP_024123606.1 | YaaR family protein | - |
| AB8O67_RS00215 (AB8O67_00215) | holB | 40283..41272 (+) | 990 | WP_044153513.1 | DNA polymerase III subunit delta' | - |
| AB8O67_RS00220 (AB8O67_00220) | ricT | 41275..42102 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| AB8O67_RS00225 (AB8O67_00225) | yabA | 42117..42476 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| AB8O67_RS00230 (AB8O67_00230) | - | 42537..43280 (+) | 744 | WP_326139650.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AB8O67_RS00235 (AB8O67_00235) | - | 43267..43566 (+) | 300 | WP_010332689.1 | GIY-YIG nuclease family protein | - |
| AB8O67_RS00240 (AB8O67_00240) | rsmI | 43541..44419 (+) | 879 | WP_326139648.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AB8O67_RS00245 (AB8O67_00245) | abrB | 44469..44759 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AB8O67_RS00250 (AB8O67_00250) | metG | 45256..47250 (+) | 1995 | WP_059334658.1 | methionine--tRNA ligase | - |
| AB8O67_RS00255 (AB8O67_00255) | - | 47329..48096 (+) | 768 | WP_059291676.1 | TatD family hydrolase | - |
| AB8O67_RS00260 (AB8O67_00260) | - | 48342..49565 (+) | 1224 | WP_044153522.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1033161 AB8O67_RS00245 WP_003226760.1 44469..44759(-) (abrB) [Bacillus halotolerans strain XYK2-4]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1033161 AB8O67_RS00245 WP_003226760.1 44469..44759(-) (abrB) [Bacillus halotolerans strain XYK2-4]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTACGTTGATGATGAAAAAATCATCCTTAAAAAATATAAGCCAAATA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTGCTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTACGTTGATGATGAAAAAATCATCCTTAAAAAATATAAGCCAAATA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTGCTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |