Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   JNUCC21_RS05665 Genome accession   NZ_CP166019
Coordinates   1092759..1093712 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus sp. JNUCC-21     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1087759..1098712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC21_RS05640 (JNUCC21_05650) argF 1089578..1090549 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  JNUCC21_RS05645 (JNUCC21_05655) - 1090625..1090804 (+) 180 WP_003155070.1 YjzC family protein -
  JNUCC21_RS05650 (JNUCC21_05660) - 1090841..1091026 (-) 186 WP_007409129.1 YjzD family protein -
  JNUCC21_RS05655 (JNUCC21_05665) - 1091286..1092020 (+) 735 WP_059367238.1 hypothetical protein -
  JNUCC21_RS05660 (JNUCC21_05670) - 1092103..1092669 (+) 567 WP_007409126.1 hypothetical protein -
  JNUCC21_RS05665 (JNUCC21_05675) med 1092759..1093712 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  JNUCC21_RS05670 (JNUCC21_05680) comZ 1093725..1093916 (+) 192 WP_003155061.1 ComZ family protein Regulator
  JNUCC21_RS05675 (JNUCC21_05685) - 1093945..1094163 (-) 219 WP_007409123.1 hypothetical protein -
  JNUCC21_RS05680 (JNUCC21_05690) - 1094330..1095268 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  JNUCC21_RS05685 (JNUCC21_05695) fabF 1095291..1096529 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  JNUCC21_RS05690 (JNUCC21_05700) - 1096612..1097397 (+) 786 WP_150941116.1 DUF2268 domain-containing protein -
  JNUCC21_RS05695 (JNUCC21_05705) - 1097571..1098557 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=1033104 JNUCC21_RS05665 WP_007409125.1 1092759..1093712(+) (med) [Bacillus sp. JNUCC-21]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1033104 JNUCC21_RS05665 WP_007409125.1 1092759..1093712(+) (med) [Bacillus sp. JNUCC-21]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785


Multiple sequence alignment