Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DYY98_RS10800 Genome accession   NZ_LT992436
Coordinates   2119868..2120713 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 1549-REV     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2114868..2125713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYY98_RS10780 - 2115136..2116977 (-) 1842 WP_000077313.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  DYY98_RS10785 metC 2116946..2118106 (-) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  DYY98_RS10790 - 2118103..2119206 (-) 1104 WP_000655697.1 PLP-dependent transferase -
  DYY98_RS10800 spo0J 2119868..2120713 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  DYY98_RS10805 - 2120867..2121748 (+) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  DYY98_RS10810 - 2121778..2121981 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  DYY98_RS10815 ychF 2121993..2123090 (+) 1098 WP_001218729.1 redox-regulated ATPase YchF -
  DYY98_RS10820 - 2123176..2123367 (-) 192 WP_001052483.1 hypothetical protein -
  DYY98_RS10830 rpsF 2123611..2123907 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  DYY98_RS10835 ssbA 2123928..2124431 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  DYY98_RS10840 rpsR 2124483..2124725 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=1032894 DYY98_RS10800 WP_001621659.1 2119868..2120713(+) (spo0J) [Staphylococcus aureus isolate 1549-REV]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1032894 DYY98_RS10800 WP_001621659.1 2119868..2120713(+) (spo0J) [Staphylococcus aureus isolate 1549-REV]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381