Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DYY98_RS08670 Genome accession   NZ_LT992436
Coordinates   1651729..1652394 (-) Length   221 a.a.
NCBI ID   WP_000697883.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 1549-REV     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1646729..1657394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DYY98_RS08650 - 1647183..1647296 (-) 114 WP_072468803.1 hypothetical protein -
  DYY98_RS08655 - 1647971..1649971 (-) 2001 WP_000776737.1 ABC transporter permease -
  DYY98_RS08660 - 1649968..1650723 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  DYY98_RS08665 nsaS 1650831..1651718 (-) 888 Protein_1613 nisin susceptibility-associated two-component system sensor histidine kinase NsaS -
  DYY98_RS08670 braR 1651729..1652394 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DYY98_RS08675 - 1652420..1652620 (-) 201 WP_000604722.1 hypothetical protein -
  DYY98_RS08680 - 1652818..1654242 (+) 1425 WP_000953745.1 alkaline phosphatase -
  DYY98_RS14200 - 1654302..1654403 (-) 102 WP_000731972.1 SE2200 family small protein -
  DYY98_RS08690 - 1654525..1654980 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  DYY98_RS08695 - 1655220..1655981 (-) 762 WP_000323450.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25433.52 Da        Isoelectric Point: 4.7961

>NTDB_id=1032890 DYY98_RS08670 WP_000697883.1 1651729..1652394(-) (braR) [Staphylococcus aureus isolate 1549-REV]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1032890 DYY98_RS08670 WP_000697883.1 1651729..1652394(-) (braR) [Staphylococcus aureus isolate 1549-REV]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995