Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB8E30_RS18135 Genome accession   NZ_CP165965
Coordinates   3427546..3427719 (-) Length   57 a.a.
NCBI ID   WP_369900675.1    Uniprot ID   -
Organism   Bacillus manliponensis strain jeju3-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3422546..3432719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8E30_RS18115 (AB8E30_18125) - 3423307..3424053 (-) 747 WP_369900671.1 YjbA family protein -
  AB8E30_RS18120 (AB8E30_18130) - 3424310..3425101 (-) 792 WP_369900672.1 DUF2268 domain-containing protein -
  AB8E30_RS18125 (AB8E30_18135) fabF 3425220..3426458 (-) 1239 WP_369900673.1 beta-ketoacyl-ACP synthase II -
  AB8E30_RS18130 (AB8E30_18140) - 3426487..3427419 (-) 933 WP_369900674.1 beta-ketoacyl-ACP synthase III -
  AB8E30_RS18135 (AB8E30_18145) comZ 3427546..3427719 (-) 174 WP_369900675.1 ComZ family protein Regulator
  AB8E30_RS18140 (AB8E30_18150) - 3427843..3428691 (-) 849 WP_369900677.1 NAD-dependent epimerase/dehydratase family protein -
  AB8E30_RS18145 (AB8E30_18155) - 3428750..3429487 (-) 738 WP_369900678.1 alpha/beta hydrolase -
  AB8E30_RS18150 (AB8E30_18160) - 3429993..3430175 (+) 183 WP_034637509.1 YjzD family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6491.66 Da        Isoelectric Point: 4.6828

>NTDB_id=1032652 AB8E30_RS18135 WP_369900675.1 3427546..3427719(-) (comZ) [Bacillus manliponensis strain jeju3-1]
MSEKNMQFLQIAFKHLPEAKAILDANGIELDMEKAQPVLELLMKVMNEAYELGKAEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=1032652 AB8E30_RS18135 WP_369900675.1 3427546..3427719(-) (comZ) [Bacillus manliponensis strain jeju3-1]
ATGAGTGAAAAGAACATGCAGTTTTTACAAATCGCTTTTAAACATTTGCCGGAAGCAAAGGCGATTTTAGATGCAAATGG
AATCGAGCTTGATATGGAAAAAGCGCAACCTGTTTTAGAGTTATTAATGAAAGTAATGAATGAAGCATACGAGCTTGGAA
AAGCGGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

59.259

94.737

0.561

Multiple sequence alignment