Detailed information NTG1032622

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LSAJ54_RS05610
• Genome accession: NZ_LT960790
• Coordinates: 1113624..1114670 (-)
• Length: 348 a.a.
• NCBI ID: WP_099947353.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain J54
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1108624..1119670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAJ54_RS05585 (LSAJ54_1121)	rpsT	1108687..1108941 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
LSAJ54_RS05590 (LSAJ54_1122)	holA	1109010..1110038 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
LSAJ54_RS05595 (LSAJ54_1123)	comEC	1110035..1112302 (-)	2268	WP_099947352.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LSAJ54_RS05600 (LSAJ54_1124)	-	1112299..1112787 (-)	489	WP_011374770.1	ComE operon protein 2	-
LSAJ54_RS05605 (LSAJ54_1125)	comEA	1112845..1113552 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
LSAJ54_RS05610 (LSAJ54_1126)	sepM	1113624..1114670 (-)	1047	WP_099947353.1	SepM family pheromone-processing serine protease	Regulator
LSAJ54_RS05615 (LSAJ54_1127)	coaD	1114672..1115169 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
LSAJ54_RS05620 (LSAJ54_1128)	rsmD	1115182..1115736 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LSAJ54_RS05625 (LSAJ54_1129)	-	1115741..1116031 (-)	291	WP_076632420.1	YlbG family protein	-
LSAJ54_RS05630 (LSAJ54_1130)	-	1116055..1117143 (-)	1089	WP_099947354.1	CAP-associated domain-containing protein	-
LSAJ54_RS05635 (LSAJ54_1131)	-	1117154..1118341 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
LSAJ54_RS05640 (LSAJ54_1132)	-	1118350..1118646 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38108.92 Da
• Isoelectric Point: 9.6949

>NTDB_id=1032622 LSAJ54_RS05610 WP_099947353.1 1113624..1114670(-) (sepM) [Latilactobacillus sakei strain J54]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETNIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYAIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=1032622 LSAJ54_RS05610 WP_099947353.1 1113624..1114670(-) (sepM) [Latilactobacillus sakei strain J54]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCAATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATGCAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (207-301)

• PDZ domain (PDZ_2) (131-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44