Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB8E26_RS13045 Genome accession   NZ_CP165963
Coordinates   2895315..2895716 (+) Length   133 a.a.
NCBI ID   WP_017356958.1    Uniprot ID   A0A6P1EKV5
Organism   Stenotrophomonas rhizophila strain busan1-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2890315..2900716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB8E26_RS13025 (AB8E26_13035) - 2890397..2892457 (+) 2061 WP_369968108.1 ATP-dependent DNA helicase -
  AB8E26_RS13030 (AB8E26_13040) tsaB 2892463..2893170 (+) 708 WP_369968109.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  AB8E26_RS13035 (AB8E26_13045) - 2893233..2894120 (-) 888 WP_159497610.1 energy transducer TonB -
  AB8E26_RS13040 (AB8E26_13050) gshB 2894117..2895067 (-) 951 WP_128097898.1 glutathione synthase -
  AB8E26_RS13045 (AB8E26_13055) pilG 2895315..2895716 (+) 402 WP_017356958.1 twitching motility response regulator PilG Regulator
  AB8E26_RS13050 (AB8E26_13060) - 2895734..2896096 (+) 363 WP_038686783.1 response regulator transcription factor -
  AB8E26_RS13055 (AB8E26_13065) - 2896096..2896626 (+) 531 WP_038686785.1 chemotaxis protein CheW -
  AB8E26_RS13060 (AB8E26_13070) - 2896671..2898707 (+) 2037 WP_369968110.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14674.04 Da        Isoelectric Point: 6.3483

>NTDB_id=1032581 AB8E26_RS13045 WP_017356958.1 2895315..2895716(+) (pilG) [Stenotrophomonas rhizophila strain busan1-1]
MTENMAAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1032581 AB8E26_RS13045 WP_017356958.1 2895315..2895716(+) (pilG) [Stenotrophomonas rhizophila strain busan1-1]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGCTTAGGGTCATGGTCATCGACGATTCGAAGACCATTCGCAG
GACCGCCGAAACACTGCTCAAGCGCGAAGGCTGCGAGGTGGTGACCGCGACCGATGGTTTCGAGGCGTTGGCCAAGATCG
CCGACCAACAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGTCGACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCATTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6P1EKV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment