Detailed information NTG1032501

Bioinformatically predicted

Overview

• Name: hexA
• Type: Machinery gene
• Locus tag: MFPB16_RS01845
• Genome accession: NZ_LT960788
• Coordinates: 406193..408796 (+)
• Length: 867 a.a.
• NCBI ID: WP_076645117.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain MFPB16A1401
• Function: DNA mismatch repair (predicted from homology) Homologous recombination

Genomic Context

Location: 401193..413796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MFPB16_RS01835 (MFPB16_0375)	-	403359..405188 (+)	1830	WP_016264636.1	APC family permease	-
MFPB16_RS01840 (MFPB16_0376)	-	405365..406171 (+)	807	WP_016264637.1	TIGR00282 family metallophosphoesterase	-
MFPB16_RS01845 (MFPB16_0377)	hexA	406193..408796 (+)	2604	WP_076645117.1	DNA mismatch repair protein MutS	Machinery gene
MFPB16_RS01850 (MFPB16_0378)	hexB	408820..410781 (+)	1962	WP_035144579.1	DNA mismatch repair endonuclease MutL	Machinery gene
MFPB16_RS01855 (MFPB16_0379)	-	410781..411326 (+)	546	WP_016264640.1	Maf family protein	-
MFPB16_RS01860 (MFPB16_0380)	-	411339..411902 (+)	564	WP_016264641.1	TIGR00730 family Rossman fold protein	-
MFPB16_RS01865 (MFPB16_0381)	ruvA	412153..412764 (+)	612	WP_016264642.1	Holliday junction branch migration protein RuvA	Machinery gene
MFPB16_RS01870 (MFPB16_0382)	ruvB	412777..413784 (+)	1008	WP_016264643.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene

Sequence

Protein

• Length: 867 a.a.
• Molecular weight: 96892.75 Da
• Isoelectric Point: 5.2556

>NTDB_id=1032501 MFPB16_RS01845 WP_076645117.1 406193..408796(+) (hexA) [Latilactobacillus sakei strain MFPB16A1401]
MLQKTKETPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDIL
VDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMDEKAGHAKQNNYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSL
DVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLG
HLQRAQAYEPSQYLKLDHSAKMNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFL
QHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIE
TAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEG
RYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHY
VQPTLRTDSREIDLVDGRHPVVEKVLGRQKYIPNAVQMGKETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSA
NLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLF
STHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYGIHVAKLAGMPETLLQRADVILGQLEDKPKAPVQ
PEIVVPAQPTAAAVEEQMALFEPEVAAPVDKKTDKVVAAIKNFDLMSATPLEALNQLYEWQKQLNKH

Nucleotide

• Length: 2604 bp

>NTDB_id=1032501 MFPB16_RS01845 WP_076645117.1 406193..408796(+) (hexA) [Latilactobacillus sakei strain MFPB16A1401]
ATGCTGCAAAAAACAAAAGAAACGCCAATGATGGCCCAATATCAAAAGGTTAAGGATCAATATCCAGACGCCTTTTTATT
TTATAGATTGGGTGATTTTTACGAATTATTCAATGATGATGCTGTTAAAGCATCACAACTTTTAGAATTAACGCTGACAG
CGCGTAATAAGAATGCAGCAGACCCCATTCCGATGTGTGGTGTGCCCCATCATGCAGCGCAAAACTACATTGATATTTTA
GTGGATCAAGGTTACAAGGTCGCCATTTGTGAGCAGATGGAAGATCCTAAAACGGCTAAGGGCATGGTCAAACGCGAAGT
TGTCCAATTAGTAACACCTGGGACCGTGATGGACGAAAAAGCCGGTCACGCTAAACAAAATAATTATTTAACGGCAGTCG
TTGCACAAGGCGATCAATTTGGCTTTGCCTATACGGATTTATCCACAGGTGAAATGAAGGTTAGCCAAATCAGTAGTTTA
GATGTGTTATTAAACGAAATGTTGAGTTTACAAACCAAAGAAGTGGTTGTGAACCATGATGTCCCAAGCGAAGTCGTTCA
AGCCTTTGTCCAACAACAAATCTTGGTTTCTTATCAAGATGAGGGGGCCGATACGGCAGAGGTCAGTTTTGTTTCTCAAA
ATATCTCACAACCACTAGCATTAGCCGTCATTAAACAGTTAGTTGTTTATTTAGCAACGACGCAAAAGCGGCACTTGGGC
CATTTACAACGCGCCCAAGCCTATGAACCTTCTCAATACTTGAAGTTGGATCATTCGGCTAAGATGAACCTCGAATTAAC
GGCTTCATTACGAACTGGCCATAAGAGTGGGACGTTATTGTGGCTACTGGATGAAACAAAGACTGCGATGGGTGGTCGTT
TATTAAAACAATGGTTGGAACGACCATTGTTGGATTTAAACCAGATTAAGAACCGGCAAAACCAAGTCGCTAGTTTCTTA
CAGCACTATTTTGAAAGGACGAACCTTCAAGAAGCCCTAACCAAGGTTTATGATTTGGAACGTCTAGCGGGTCGCGTTGC
TTTTGGGAGCGTTAATGGTCGCGATTTGATTCAATTAAAAACATCCTTAGAACAGATTCCAAAGATTAAAGATGTTTTGA
CGGGCATTAACGAAACGCAGGCTTTTGATCAAGCGTTAACGCGTTTGGATCCAGTTGATGATGTGCGGACGTTAATTGAA
ACAGCGATTAACCCGGATTCACCGATTTCAGTGACTGATGGCGGGATTATTCAAGATGGTTACGACGAACAACTTGATCA
ATACCGCAATGCGATGTCTAACGGCAAGCAGTGGTTGGCGCAATTAGAGGCGCAAGAACGAGAAGCCACGGGCATTCATA
ATTTGAAAATCGGCTTTAACCGCGTCTTTGGGTATTATATCGAAGTCACGCGGGCTAACTTGAGTTCATTACCGGAAGGG
CGGTATGAACGCAAACAAACGTTAACCAACGCCGAACGATTCATCACACCGGAACTAAAAGAAAAAGAACAACTGATTTT
AGAGGCGGAAGAACGCTCAACCGCTTTAGAATACGAATTGTTTACCCAAGTTCGGGAACAAGTGAAGTTACAGATTGAAC
GGCTCCAAACATTGGCTAAAGGCGTAGCGGCCCTAGATGTCTTGCAAAGTTTTGCGGTCGTCAGCGAAAGCTACCACTAT
GTCCAACCAACATTAAGAACTGATAGTCGCGAAATTGATTTAGTCGATGGCCGTCATCCGGTGGTTGAAAAGGTATTGGG
ACGCCAAAAATATATCCCCAATGCTGTTCAAATGGGCAAAGAAACGGATATGTTATTAATTACCGGACCTAATATGTCTG
GTAAAAGTACCTACATGCGGCAATTGGCCTTAACGGTCATCATGGCGCAAATGGGTTGTTTTGTACCTGCCAAGTCAGCG
AACTTGCCTGTATTTGATCAAATTTTTACCCGCATTGGCGCGGCAGATGATTTGATTTCAGGACAAAGTACGTTTATGGT
AGAAATGATGGAAGCCAACCGTGCAATTATGAGTGCGACCGCCAATAGTTTAATTCTTTTCGATGAAATTGGTCGGGGAA
CGGCAACTTACGATGGAATGGCCTTGGCACAAGCGATTATCGAATATATCCATGATCACGTCCACGCCAAGACGCTCTTT
TCAACGCATTATCATGAATTGACGGCTTTAGCCGATACGTTGACCGCCCTCCGTAACGTGCATGTTGGTGCGGTTGAGGA
AAACGGCGAGTTGGTCTTCTTACACAAGATGTTGGCCGGACCTGCGGATAAGTCTTACGGGATTCATGTCGCTAAACTAG
CGGGCATGCCAGAAACCTTATTACAACGGGCCGATGTTATTTTAGGTCAGTTAGAAGATAAACCAAAAGCACCGGTGCAA
CCAGAAATAGTCGTACCAGCACAACCGACTGCAGCGGCTGTCGAAGAACAGATGGCGCTTTTTGAACCAGAAGTGGCGGC
CCCGGTCGATAAGAAAACAGATAAAGTGGTAGCGGCAATTAAGAATTTTGATTTGATGAGCGCCACACCACTAGAAGCCC
TCAATCAATTATATGAGTGGCAAAAGCAATTAAATAAACATTAA

Domains

Predicted by InterProScan.

• MutS domain I (MutS_I) (8-119)

• MutS domain II (MutS_II) (128-243)

• MutS family domain IV (MutS_IV) (420-512)

• MutS domain V (MutS_V) (605-792)

• MutS domain III (MutS_III) (263-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
hexA	Streptococcus pneumoniae R6	52.079	99.885	0.52
mutS	Pseudomonas stutzeri strain ATCC 17587	38.655	100	0.391