Detailed information NTG1032290

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LSAF01_RS05355
• Genome accession: NZ_LT960777
• Coordinates: 1073492..1074538 (-)
• Length: 348 a.a.
• NCBI ID: WP_056946687.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FLEC01
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1068492..1079538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAF01_RS05330 (LSAF01_1072)	rpsT	1068550..1068804 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
LSAF01_RS05335 (LSAF01_1073)	holA	1068873..1069901 (-)	1029	WP_011374768.1	DNA polymerase III subunit delta	-
LSAF01_RS05340 (LSAF01_1074)	comEC	1069898..1072165 (-)	2268	WP_099947352.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LSAF01_RS05345 (LSAF01_1075)	-	1072162..1072650 (-)	489	WP_011374770.1	ComE operon protein 2	-
LSAF01_RS05350 (LSAF01_1076)	comEA	1072708..1073415 (-)	708	WP_231952379.1	helix-hairpin-helix domain-containing protein	Machinery gene
LSAF01_RS05355 (LSAF01_1077)	sepM	1073492..1074538 (-)	1047	WP_056946687.1	SepM family pheromone-processing serine protease	Regulator
LSAF01_RS05360 (LSAF01_1078)	coaD	1074540..1075037 (-)	498	WP_011374773.1	pantetheine-phosphate adenylyltransferase	-
LSAF01_RS05365 (LSAF01_1079)	rsmD	1075050..1075604 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LSAF01_RS05370 (LSAF01_1080)	-	1075609..1075899 (-)	291	WP_011374775.1	YlbG family protein	-
LSAF01_RS05375 (LSAF01_1081)	-	1075923..1077011 (-)	1089	WP_011374776.1	CAP-associated domain-containing protein	-
LSAF01_RS05380 (LSAF01_1082)	-	1077022..1078209 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
LSAF01_RS05385 (LSAF01_1083)	-	1078218..1078514 (-)	297	WP_011374778.1	YlaN family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38138.94 Da
• Isoelectric Point: 9.6949

>NTDB_id=1032290 LSAF01_RS05355 WP_056946687.1 1073492..1074538(-) (sepM) [Latilactobacillus sakei strain FLEC01]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPRTHHPGLGITLTDHSKIETNIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRTIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=1032290 LSAF01_RS05355 WP_056946687.1 1073492..1074538(-) (sepM) [Latilactobacillus sakei strain FLEC01]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCAATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTACAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (207-310)

• PDZ domain (PDZ_2) (131-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44