Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | QQK52_RS13875 | Genome accession | NZ_AP027963 |
| Coordinates | 2835026..2835655 (-) | Length | 209 a.a. |
| NCBI ID | WP_000793792.1 | Uniprot ID | A0A3T8SP29 |
| Organism | Escherichia coli strain VE-T9 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2830026..2840655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK52_RS13860 (VET9_26780) | helD | 2830268..2832322 (-) | 2055 | WP_001491169.1 | DNA helicase IV | - |
| QQK52_RS13865 (VET9_26790) | yccF | 2832445..2832891 (+) | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| QQK52_RS13870 (VET9_26800) | yccS | 2832901..2835063 (+) | 2163 | WP_000875050.1 | YccS family putative transporter | - |
| QQK52_RS13875 (VET9_26810) | sxy/tfoX | 2835026..2835655 (-) | 630 | WP_000793792.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| QQK52_RS13880 (VET9_26820) | sulA | 2835874..2836383 (+) | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
| QQK52_RS13885 (VET9_26840) | ompA | 2836740..2837792 (+) | 1053 | WP_000750419.1 | porin OmpA | - |
| QQK52_RS13890 (VET9_26850) | matP | 2837868..2838320 (-) | 453 | WP_000877158.1 | macrodomain Ter protein MatP | - |
| QQK52_RS13895 (VET9_26860) | ycbZ | 2838506..2840266 (+) | 1761 | WP_000156495.1 | Lon protease family protein | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24174.04 Da Isoelectric Point: 9.2180
>NTDB_id=103175 QQK52_RS13875 WP_000793792.1 2835026..2835655(-) (sxy/tfoX) [Escherichia coli strain VE-T9]
MKNLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKNLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=103175 QQK52_RS13875 WP_000793792.1 2835026..2835655(-) (sxy/tfoX) [Escherichia coli strain VE-T9]
ATGAAAAACCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGGATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTAGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAACCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGGATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTAGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |