Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB7T04_RS07165 Genome accession   NZ_CP165780
Coordinates   1352725..1353321 (+) Length   198 a.a.
NCBI ID   WP_101562971.1    Uniprot ID   -
Organism   Bacillus velezensis strain L-15     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1347725..1358321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB7T04_RS07135 (AB7T04_07135) - 1347940..1348395 (+) 456 WP_172614650.1 flavodoxin -
  AB7T04_RS07140 (AB7T04_07140) dapD 1348477..1349187 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB7T04_RS07145 (AB7T04_07145) - 1349258..1350382 (+) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  AB7T04_RS07150 (AB7T04_07150) - 1350443..1350688 (+) 246 WP_003154596.1 YkuS family protein -
  AB7T04_RS07155 (AB7T04_07155) - 1350722..1351528 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  AB7T04_RS07160 (AB7T04_07160) - 1351815..1352273 (+) 459 WP_071391901.1 redoxin domain-containing protein -
  AB7T04_RS07165 (AB7T04_07165) rok 1352725..1353321 (+) 597 WP_101562971.1 transcriptional regulator Rok Regulator
  AB7T04_RS07170 (AB7T04_07170) - 1353341..1354333 (-) 993 WP_264101543.1 sporulation protein -
  AB7T04_RS07175 (AB7T04_07175) - 1354479..1355081 (+) 603 WP_071391898.1 molybdenum cofactor guanylyltransferase -
  AB7T04_RS07180 (AB7T04_07180) - 1355133..1356152 (+) 1020 WP_071391897.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB7T04_RS07185 (AB7T04_07185) glp 1356170..1357462 (+) 1293 WP_264101544.1 gephyrin-like molybdotransferase Glp -
  AB7T04_RS07190 (AB7T04_07190) mobB 1357423..1357944 (+) 522 WP_102421867.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22641.65 Da        Isoelectric Point: 9.4832

>NTDB_id=1031722 AB7T04_RS07165 WP_101562971.1 1352725..1353321(+) (rok) [Bacillus velezensis strain L-15]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYEKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1031722 AB7T04_RS07165 WP_101562971.1 1352725..1353321(+) (rok) [Bacillus velezensis strain L-15]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGAAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.113

97.98

0.854

Multiple sequence alignment