Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB7T04_RS07065 Genome accession   NZ_CP165780
Coordinates   1336860..1337324 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain L-15     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1331860..1342324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB7T04_RS07045 (AB7T04_07045) - 1332340..1334160 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  AB7T04_RS07050 (AB7T04_07050) - 1334136..1335355 (-) 1220 Protein_1329 aminotransferase A -
  AB7T04_RS07055 (AB7T04_07055) - 1335556..1335717 (-) 162 WP_007409608.1 hypothetical protein -
  AB7T04_RS07060 (AB7T04_07060) cheV 1335906..1336817 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  AB7T04_RS07065 (AB7T04_07065) kre 1336860..1337324 (-) 465 WP_003154622.1 YkyB family protein Regulator
  AB7T04_RS07070 (AB7T04_07070) - 1337447..1338739 (-) 1293 WP_369719102.1 MFS transporter -
  AB7T04_RS07075 (AB7T04_07075) - 1338815..1339309 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  AB7T04_RS07080 (AB7T04_07080) - 1339384..1340247 (-) 864 WP_071391907.1 metallophosphoesterase -
  AB7T04_RS07085 (AB7T04_07085) fadH 1340391..1341155 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  AB7T04_RS07090 (AB7T04_07090) - 1341266..1341814 (+) 549 WP_071391906.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1031721 AB7T04_RS07065 WP_003154622.1 1336860..1337324(-) (kre) [Bacillus velezensis strain L-15]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1031721 AB7T04_RS07065 WP_003154622.1 1336860..1337324(-) (kre) [Bacillus velezensis strain L-15]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment