Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB7T04_RS05665 Genome accession   NZ_CP165780
Coordinates   1081100..1081291 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain L-15     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1076100..1086291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB7T04_RS05635 (AB7T04_05630) argF 1076952..1077923 (+) 972 WP_101562891.1 ornithine carbamoyltransferase -
  AB7T04_RS05640 (AB7T04_05635) - 1077999..1078178 (+) 180 WP_003155070.1 YjzC family protein -
  AB7T04_RS05645 (AB7T04_05640) - 1078215..1078400 (-) 186 WP_032874447.1 YjzD family protein -
  AB7T04_RS05650 (AB7T04_05645) - 1078661..1079395 (+) 735 WP_070081619.1 hypothetical protein -
  AB7T04_RS05655 (AB7T04_05650) - 1079478..1080044 (+) 567 WP_264101489.1 hypothetical protein -
  AB7T04_RS05660 (AB7T04_05655) med 1080134..1081087 (+) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  AB7T04_RS05665 (AB7T04_05660) comZ 1081100..1081291 (+) 192 WP_003155061.1 ComZ family protein Regulator
  AB7T04_RS05670 (AB7T04_05665) - 1081321..1081539 (-) 219 WP_264101490.1 hypothetical protein -
  AB7T04_RS05675 (AB7T04_05670) - 1081707..1082645 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  AB7T04_RS05680 (AB7T04_05675) fabF 1082668..1083906 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  AB7T04_RS05685 (AB7T04_05680) - 1083990..1084775 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  AB7T04_RS05690 (AB7T04_05685) - 1084949..1085935 (+) 987 WP_031378493.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1031714 AB7T04_RS05665 WP_003155061.1 1081100..1081291(+) (comZ) [Bacillus velezensis strain L-15]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1031714 AB7T04_RS05665 WP_003155061.1 1081100..1081291(+) (comZ) [Bacillus velezensis strain L-15]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment