Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | BD28_RS03080 | Genome accession | NZ_CP007189 |
| Coordinates | 595378..595761 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain HF5-5-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 590378..600761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD28_RS03060 (BD28_03055) | - | 590457..592391 (-) | 1935 | WP_004309024.1 | ribonuclease R family protein | - |
| BD28_RS03065 (BD28_03060) | ilvC | 592510..593532 (+) | 1023 | WP_002921147.1 | ketol-acid reductoisomerase | - |
| BD28_RS03070 (BD28_03065) | - | 593536..594618 (+) | 1083 | WP_002876692.1 | divergent polysaccharide deacetylase family protein | - |
| BD28_RS03075 (BD28_03070) | dprA | 594608..595381 (+) | 774 | WP_022552258.1 | DNA-processing protein DprA | Machinery gene |
| BD28_RS03080 (BD28_03075) | dprB | 595378..595761 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| BD28_RS03085 (BD28_03080) | - | 595790..596629 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| BD28_RS03090 (BD28_03085) | msrA | 596805..597302 (-) | 498 | WP_002866497.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| BD28_RS03095 (BD28_03090) | ppa | 597343..597861 (-) | 519 | WP_002855031.1 | inorganic diphosphatase | - |
| BD28_RS03100 (BD28_03095) | adk | 597871..598449 (-) | 579 | WP_002855137.1 | adenylate kinase | - |
| BD28_RS03105 (BD28_03100) | aspS | 598446..600197 (-) | 1752 | WP_012006668.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=103108 BD28_RS03080 WP_002852281.1 595378..595761(+) (dprB) [Campylobacter jejuni strain HF5-5-1]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=103108 BD28_RS03080 WP_002852281.1 595378..595761(+) (dprB) [Campylobacter jejuni strain HF5-5-1]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |