Detailed information NTG1030867

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BQ9544_RS22990
• Genome accession: NZ_LT827011
• Coordinates: 4322959..4323984 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644913.1
• Uniprot ID: B7UNQ4
• Organism: Escherichia coli O127:H6 isolate EPEC E2348/69 variety
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4317959..4328984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ9544_RS22960 (BQ9544_4232)	zapB	4318118..4318363 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
BQ9544_RS22965 (BQ9544_4233)	rraA	4318448..4318933 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BQ9544_RS22970 (BQ9544_4234)	menA	4319026..4319952 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BQ9544_RS22975 (BQ9544_4235)	hslU	4320019..4321350 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
BQ9544_RS22980 (BQ9544_4236)	hslV	4321360..4321890 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BQ9544_RS22985 (BQ9544_4237)	ftsN	4321983..4322867 (-)	885	WP_000068850.1	cell division protein FtsN	-
BQ9544_RS22990 (BQ9544_4238)	cytR	4322959..4323984 (-)	1026	WP_000644913.1	DNA-binding transcriptional regulator CytR	Regulator
BQ9544_RS22995 (BQ9544_4239)	priA	4324140..4326338 (-)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
BQ9544_RS23000 (BQ9544_4240)	rpmE	4326541..4326753 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
BQ9544_RS23005 (BQ9544_4241)	yiiX	4326814..4327422 (-)	609	WP_000702309.1	YiiX family permuted papain-like enzyme	-
BQ9544_RS23010 (BQ9544_4242)	metJ	4327482..4327799 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37849.81 Da
• Isoelectric Point: 6.3842

>NTDB_id=1030867 BQ9544_RS22990 WP_000644913.1 4322959..4323984(-) (cytR) [Escherichia coli O127:H6 isolate EPEC E2348/69 variety]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQTTRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1030867 BQ9544_RS22990 WP_000644913.1 4322959..4323984(-) (cytR) [Escherichia coli O127:H6 isolate EPEC E2348/69 variety]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGACCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: B7UNQ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628